Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FGD4Q96M96 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.98■□□□□ 0.63
FGD4Q96M96 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
FGD4Q96M96 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FGD4Q96M96 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
FGD4Q96M96 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FGD4Q96M96 AC108860.2-201ENST00000562760 2183 ntBASIC18.98■□□□□ 0.63
FGD4Q96M96 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FGD4Q96M96 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FGD4Q96M96 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FGD4Q96M96 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
FGD4Q96M96 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
FGD4Q96M96 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.98■□□□□ 0.63
FGD4Q96M96 AC015922.1-201ENST00000421102 1152 ntBASIC18.98■□□□□ 0.63
FGD4Q96M96 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.98■□□□□ 0.63
FGD4Q96M96 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.98■□□□□ 0.63
FGD4Q96M96 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FGD4Q96M96 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.98■□□□□ 0.63
FGD4Q96M96 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.98■□□□□ 0.63
FGD4Q96M96 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FGD4Q96M96 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.98■□□□□ 0.63
FGD4Q96M96 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.98■□□□□ 0.63
FGD4Q96M96 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.98■□□□□ 0.63
FGD4Q96M96 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FGD4Q96M96 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FGD4Q96M96 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.98■□□□□ 0.63
FGD4Q96M96 AP001350.2-201ENST00000625104 1094 ntBASIC18.98■□□□□ 0.63
FGD4Q96M96 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.98■□□□□ 0.63
FGD4Q96M96 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.98■□□□□ 0.63
FGD4Q96M96 AF228730.6-201ENST00000641497 218 ntBASIC18.98■□□□□ 0.63
FGD4Q96M96 AC084121.3-201ENST00000641716 218 ntBASIC18.98■□□□□ 0.63
FGD4Q96M96 AC105233.6-201ENST00000642093 218 ntBASIC18.98■□□□□ 0.63
FGD4Q96M96 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FGD4Q96M96 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FGD4Q96M96 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FGD4Q96M96 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
FGD4Q96M96 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.98■□□□□ 0.63
FGD4Q96M96 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FGD4Q96M96 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.98■□□□□ 0.63
FGD4Q96M96 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.98■□□□□ 0.63
FGD4Q96M96 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.98■□□□□ 0.63
FGD4Q96M96 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.98■□□□□ 0.63
FGD4Q96M96 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.98■□□□□ 0.63
FGD4Q96M96 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FGD4Q96M96 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FGD4Q96M96 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.98■□□□□ 0.63
FGD4Q96M96 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FGD4Q96M96 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FGD4Q96M96 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.97■□□□□ 0.63
FGD4Q96M96 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.97■□□□□ 0.63
FGD4Q96M96 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.97■□□□□ 0.63
FGD4Q96M96 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FGD4Q96M96 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.97■□□□□ 0.63
FGD4Q96M96 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FGD4Q96M96 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FGD4Q96M96 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FGD4Q96M96 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FGD4Q96M96 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FGD4Q96M96 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FGD4Q96M96 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.97■□□□□ 0.63
FGD4Q96M96 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FGD4Q96M96 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
FGD4Q96M96 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FGD4Q96M96 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.97■□□□□ 0.63
FGD4Q96M96 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FGD4Q96M96 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.97■□□□□ 0.63
FGD4Q96M96 MRPS18AP1-201ENST00000414458 589 ntBASIC18.97■□□□□ 0.63
FGD4Q96M96 AC069120.2-201ENST00000524091 540 ntBASIC18.97■□□□□ 0.63
FGD4Q96M96 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.97■□□□□ 0.63
FGD4Q96M96 AC239800.4-201ENST00000603712 296 ntBASIC18.97■□□□□ 0.63
FGD4Q96M96 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.97■□□□□ 0.63
FGD4Q96M96 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
FGD4Q96M96 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FGD4Q96M96 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
FGD4Q96M96 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FGD4Q96M96 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
FGD4Q96M96 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.97■□□□□ 0.63
FGD4Q96M96 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FGD4Q96M96 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
FGD4Q96M96 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
FGD4Q96M96 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FGD4Q96M96 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FGD4Q96M96 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FGD4Q96M96 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FGD4Q96M96 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.96■□□□□ 0.63
FGD4Q96M96 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FGD4Q96M96 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
FGD4Q96M96 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FGD4Q96M96 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FGD4Q96M96 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FGD4Q96M96 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FGD4Q96M96 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
FGD4Q96M96 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
FGD4Q96M96 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
FGD4Q96M96 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FGD4Q96M96 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FGD4Q96M96 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FGD4Q96M96 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FGD4Q96M96 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FGD4Q96M96 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms