Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 AL023806.1-201ENST00000603994 1649 ntBASIC19.69■□□□□ 0.74
TRIM47Q96LD4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 MEIS3P1-201ENST00000495167 958 ntBASIC19.69■□□□□ 0.74
TRIM47Q96LD4 SLC25A39P2-201ENST00000537614 270 ntBASIC19.69■□□□□ 0.74
TRIM47Q96LD4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 AL390754.1-201ENST00000619088 582 ntBASIC19.69■□□□□ 0.74
TRIM47Q96LD4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM47Q96LD4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 TREML5P-201ENST00000421694 576 ntBASIC19.68■□□□□ 0.74
TRIM47Q96LD4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 RBPMS2P1-201ENST00000437762 623 ntBASIC19.68■□□□□ 0.74
TRIM47Q96LD4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 AL135744.1-201ENST00000565098 629 ntBASIC19.68■□□□□ 0.74
TRIM47Q96LD4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 AL138688.1-201ENST00000624851 1594 ntBASIC19.68■□□□□ 0.74
TRIM47Q96LD4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM47Q96LD4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 MYCLP1-201ENST00000372451 1075 ntBASIC19.67■□□□□ 0.74
TRIM47Q96LD4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 DUX4L17-201ENST00000557360 1267 ntBASIC19.67■□□□□ 0.74
TRIM47Q96LD4 AC140878.1-201ENST00000565277 250 ntBASIC19.67■□□□□ 0.74
TRIM47Q96LD4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 AC129492.6-201ENST00000611383 1305 ntBASIC19.67■□□□□ 0.74
TRIM47Q96LD4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM47Q96LD4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM47Q96LD4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM47Q96LD4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms