Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.85■□□□□ 0.45
CALR3Q96L12 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CALR3Q96L12 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
CALR3Q96L12 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CALR3Q96L12 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.85■□□□□ 0.45
CALR3Q96L12 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.85■□□□□ 0.45
CALR3Q96L12 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CALR3Q96L12 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CALR3Q96L12 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CALR3Q96L12 AL590326.2-201ENST00000625139 305 ntBASIC17.85■□□□□ 0.45
CALR3Q96L12 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.85■□□□□ 0.45
CALR3Q96L12 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CALR3Q96L12 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CALR3Q96L12 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.85■□□□□ 0.45
CALR3Q96L12 CROCCP1-201ENST00000426910 5675 ntBASIC17.85■□□□□ 0.45
CALR3Q96L12 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.85■□□□□ 0.45
CALR3Q96L12 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CALR3Q96L12 AC092364.2-201ENST00000596710 2692 ntBASIC17.85■□□□□ 0.45
CALR3Q96L12 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CALR3Q96L12 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CALR3Q96L12 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.84■□□□□ 0.45
CALR3Q96L12 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.84■□□□□ 0.45
CALR3Q96L12 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CALR3Q96L12 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CALR3Q96L12 AP005117.1-201ENST00000584346 1413 ntBASIC17.84■□□□□ 0.45
CALR3Q96L12 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CALR3Q96L12 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.84■□□□□ 0.45
CALR3Q96L12 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CALR3Q96L12 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.84■□□□□ 0.45
CALR3Q96L12 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.84■□□□□ 0.45
CALR3Q96L12 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CALR3Q96L12 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CALR3Q96L12 MIR3180-1-201ENST00000580374 94 ntBASIC17.84■□□□□ 0.45
CALR3Q96L12 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.84■□□□□ 0.45
CALR3Q96L12 MIR3180-3-201ENST00000584616 94 ntBASIC17.84■□□□□ 0.45
CALR3Q96L12 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CALR3Q96L12 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CALR3Q96L12 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.84■□□□□ 0.45
CALR3Q96L12 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
CALR3Q96L12 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CALR3Q96L12 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CALR3Q96L12 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CALR3Q96L12 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CALR3Q96L12 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CALR3Q96L12 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CALR3Q96L12 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CALR3Q96L12 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CALR3Q96L12 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CALR3Q96L12 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CALR3Q96L12 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.83■□□□□ 0.45
CALR3Q96L12 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.83■□□□□ 0.45
CALR3Q96L12 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CALR3Q96L12 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.83■□□□□ 0.45
CALR3Q96L12 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CALR3Q96L12 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CALR3Q96L12 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.83■□□□□ 0.45
CALR3Q96L12 AL365203.3-201ENST00000609742 2057 ntBASIC17.83■□□□□ 0.45
CALR3Q96L12 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CALR3Q96L12 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CALR3Q96L12 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CALR3Q96L12 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CALR3Q96L12 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.83■□□□□ 0.44
CALR3Q96L12 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CALR3Q96L12 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CALR3Q96L12 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CALR3Q96L12 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CALR3Q96L12 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CALR3Q96L12 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CALR3Q96L12 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CALR3Q96L12 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.83■□□□□ 0.44
CALR3Q96L12 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.83■□□□□ 0.44
CALR3Q96L12 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
CALR3Q96L12 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CALR3Q96L12 AL022326.1-202ENST00000641533 845 ntBASIC17.83■□□□□ 0.44
CALR3Q96L12 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CALR3Q96L12 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CALR3Q96L12 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CALR3Q96L12 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.83■□□□□ 0.44
CALR3Q96L12 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.83■□□□□ 0.44
CALR3Q96L12 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CALR3Q96L12 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.83■□□□□ 0.44
CALR3Q96L12 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CALR3Q96L12 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
CALR3Q96L12 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CALR3Q96L12 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CALR3Q96L12 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CALR3Q96L12 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CALR3Q96L12 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.83■□□□□ 0.44
CALR3Q96L12 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.82■□□□□ 0.44
CALR3Q96L12 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CALR3Q96L12 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CALR3Q96L12 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.82■□□□□ 0.44
CALR3Q96L12 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.82■□□□□ 0.44
CALR3Q96L12 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.82■□□□□ 0.44
CALR3Q96L12 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CALR3Q96L12 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CALR3Q96L12 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.82■□□□□ 0.44
CALR3Q96L12 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CALR3Q96L12 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CALR3Q96L12 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms