Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 AC087163.2-201ENST00000457299 853 ntBASIC13.17□□□□□ -0.3
RAX2Q96IS3 AC211476.1-201ENST00000503899 468 ntBASIC13.17□□□□□ -0.3
RAX2Q96IS3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.17□□□□□ -0.3
RAX2Q96IS3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.17□□□□□ -0.3
RAX2Q96IS3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.17□□□□□ -0.3
RAX2Q96IS3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.17□□□□□ -0.3
RAX2Q96IS3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.17□□□□□ -0.3
RAX2Q96IS3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAX2Q96IS3 AC023141.13-201ENST00000604991 943 ntBASIC13.17□□□□□ -0.3
RAX2Q96IS3 AL078644.1-201ENST00000609881 752 ntBASIC13.17□□□□□ -0.3
RAX2Q96IS3 C20orf181-201ENST00000623918 480 ntBASIC13.17□□□□□ -0.3
RAX2Q96IS3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.17□□□□□ -0.3
RAX2Q96IS3 AC007064.4-201ENST00000637740 555 ntBASIC13.17□□□□□ -0.3
RAX2Q96IS3 AC079781.4-201ENST00000641908 219 ntBASIC13.17□□□□□ -0.3
RAX2Q96IS3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RAX2Q96IS3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAX2Q96IS3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAX2Q96IS3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAX2Q96IS3 MIR600HG-201ENST00000449175 5984 ntBASIC13.17□□□□□ -0.3
RAX2Q96IS3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.17□□□□□ -0.3
RAX2Q96IS3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAX2Q96IS3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAX2Q96IS3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAX2Q96IS3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAX2Q96IS3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAX2Q96IS3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAX2Q96IS3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RAX2Q96IS3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAX2Q96IS3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAX2Q96IS3 AC046158.3-201ENST00000624947 2558 ntBASIC13.17□□□□□ -0.3
RAX2Q96IS3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAX2Q96IS3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 AC134043.2-201ENST00000624206 2238 ntBASIC13.16□□□□□ -0.3
RAX2Q96IS3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 SLC25A6P2-201ENST00000497974 877 ntBASIC13.16□□□□□ -0.3
RAX2Q96IS3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 AP001160.2-201ENST00000596071 487 ntBASIC13.16□□□□□ -0.3
RAX2Q96IS3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 AC009053.2-201ENST00000563701 2365 ntBASIC13.16□□□□□ -0.3
RAX2Q96IS3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.16□□□□□ -0.3
RAX2Q96IS3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAX2Q96IS3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAX2Q96IS3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAX2Q96IS3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAX2Q96IS3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAX2Q96IS3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAX2Q96IS3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAX2Q96IS3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAX2Q96IS3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.15□□□□□ -0.3
RAX2Q96IS3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.15□□□□□ -0.3
RAX2Q96IS3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RAX2Q96IS3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAX2Q96IS3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAX2Q96IS3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAX2Q96IS3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.15□□□□□ -0.3
RAX2Q96IS3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAX2Q96IS3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms