Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR1Q969H4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR1Q969H4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.4■□□□□ 0.86
CNKSR1Q969H4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR1Q969H4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR1Q969H4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR1Q969H4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
CNKSR1Q969H4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNKSR1Q969H4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.39■□□□□ 0.86
CNKSR1Q969H4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNKSR1Q969H4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CNKSR1Q969H4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 SERBP1P3-201ENST00000459980 809 ntBASIC20.39■□□□□ 0.85
CNKSR1Q969H4 RN7SL837P-201ENST00000463010 287 ntBASIC20.39■□□□□ 0.85
CNKSR1Q969H4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 BICD1-207ENST00000551848 1962 ntBASIC20.39■□□□□ 0.85
CNKSR1Q969H4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CNKSR1Q969H4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 SPDYE18-201ENST00000510091 1050 ntBASIC20.38■□□□□ 0.85
CNKSR1Q969H4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNKSR1Q969H4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 MEP1AP4-201ENST00000423244 1087 ntBASIC20.37■□□□□ 0.85
CNKSR1Q969H4 TTTY23B-201ENST00000442790 549 ntBASIC20.37■□□□□ 0.85
CNKSR1Q969H4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR1Q969H4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 AC116353.5-201ENST00000638148 1699 ntBASIC20.36■□□□□ 0.85
CNKSR1Q969H4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms