Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AL121894.2-201ENST00000602977 491 ntBASIC19.82■□□□□ 0.76
BRF1Q92994 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BRF1Q92994 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRF1Q92994 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.82■□□□□ 0.76
BRF1Q92994 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
BRF1Q92994 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
BRF1Q92994 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BRF1Q92994 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.82■□□□□ 0.76
BRF1Q92994 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
BRF1Q92994 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRF1Q92994 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
BRF1Q92994 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRF1Q92994 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
BRF1Q92994 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRF1Q92994 HLA-A-201ENST00000376802 1334 ntBASIC19.81■□□□□ 0.76
BRF1Q92994 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.81■□□□□ 0.76
BRF1Q92994 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRF1Q92994 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRF1Q92994 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRF1Q92994 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.81■□□□□ 0.76
BRF1Q92994 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.81■□□□□ 0.76
BRF1Q92994 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.81■□□□□ 0.76
BRF1Q92994 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
BRF1Q92994 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.81■□□□□ 0.76
BRF1Q92994 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.81■□□□□ 0.76
BRF1Q92994 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
BRF1Q92994 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BRF1Q92994 AC006538.1-201ENST00000567905 1585 ntBASIC19.81■□□□□ 0.76
BRF1Q92994 AC131009.4-201ENST00000624048 1740 ntBASIC19.81■□□□□ 0.76
BRF1Q92994 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
BRF1Q92994 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BRF1Q92994 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BRF1Q92994 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRF1Q92994 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.81■□□□□ 0.76
BRF1Q92994 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BRF1Q92994 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
BRF1Q92994 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.81■□□□□ 0.76
BRF1Q92994 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.81■□□□□ 0.76
BRF1Q92994 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRF1Q92994 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
BRF1Q92994 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.8■□□□□ 0.76
BRF1Q92994 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRF1Q92994 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
BRF1Q92994 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRF1Q92994 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRF1Q92994 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRF1Q92994 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRF1Q92994 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRF1Q92994 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
BRF1Q92994 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
BRF1Q92994 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRF1Q92994 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRF1Q92994 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRF1Q92994 MRPL20P1-201ENST00000400819 433 ntBASIC19.8■□□□□ 0.76
BRF1Q92994 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
BRF1Q92994 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.8■□□□□ 0.76
BRF1Q92994 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRF1Q92994 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.8■□□□□ 0.76
BRF1Q92994 AC091167.2-201ENST00000579581 588 ntBASIC19.8■□□□□ 0.76
BRF1Q92994 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
BRF1Q92994 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRF1Q92994 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRF1Q92994 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.8■□□□□ 0.76
BRF1Q92994 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.8■□□□□ 0.76
BRF1Q92994 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BRF1Q92994 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRF1Q92994 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.8■□□□□ 0.76
BRF1Q92994 ALOX12P2-203ENST00000570921 1945 ntBASIC19.8■□□□□ 0.76
BRF1Q92994 AC018695.7-201ENST00000624587 2492 ntBASIC19.8■□□□□ 0.76
BRF1Q92994 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
BRF1Q92994 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
BRF1Q92994 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BRF1Q92994 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BRF1Q92994 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.79■□□□□ 0.76
BRF1Q92994 AC129492.6-201ENST00000611383 1305 ntBASIC19.79■□□□□ 0.76
BRF1Q92994 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRF1Q92994 PCDH8P1-201ENST00000428983 2773 ntBASIC19.79■□□□□ 0.76
BRF1Q92994 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRF1Q92994 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRF1Q92994 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRF1Q92994 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.79■□□□□ 0.76
BRF1Q92994 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRF1Q92994 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.79■□□□□ 0.76
BRF1Q92994 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
BRF1Q92994 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.79■□□□□ 0.76
BRF1Q92994 AC108751.1-201ENST00000490852 363 ntBASIC19.79■□□□□ 0.76
BRF1Q92994 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.79■□□□□ 0.76
BRF1Q92994 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.79■□□□□ 0.76
BRF1Q92994 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BRF1Q92994 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
BRF1Q92994 AL662844.1-201ENST00000546340 181 ntBASIC19.79■□□□□ 0.76
BRF1Q92994 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
BRF1Q92994 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.79■□□□□ 0.76
BRF1Q92994 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.79■□□□□ 0.76
BRF1Q92994 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRF1Q92994 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.79■□□□□ 0.76
BRF1Q92994 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRF1Q92994 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
BRF1Q92994 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.79■□□□□ 0.76
BRF1Q92994 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms