Protein–RNA interactions for Protein: Q92622

RUBCN, Run domain Beclin-1-interacting and cysteine-rich domain-containing protein, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCNQ92622 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RUBCNQ92622 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.14■□□□□ 0.5
RUBCNQ92622 TP73-AS1-210ENST00000637775 1455 ntBASIC18.14■□□□□ 0.5
RUBCNQ92622 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.14■□□□□ 0.49
RUBCNQ92622 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RUBCNQ92622 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RUBCNQ92622 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.14■□□□□ 0.49
RUBCNQ92622 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.14■□□□□ 0.49
RUBCNQ92622 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RUBCNQ92622 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RUBCNQ92622 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RUBCNQ92622 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RUBCNQ92622 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RUBCNQ92622 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.14■□□□□ 0.49
RUBCNQ92622 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.14■□□□□ 0.49
RUBCNQ92622 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.14■□□□□ 0.49
RUBCNQ92622 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.14■□□□□ 0.49
RUBCNQ92622 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.14■□□□□ 0.49
RUBCNQ92622 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.14■□□□□ 0.49
RUBCNQ92622 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.14■□□□□ 0.49
RUBCNQ92622 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.14■□□□□ 0.49
RUBCNQ92622 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RUBCNQ92622 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RUBCNQ92622 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.14■□□□□ 0.49
RUBCNQ92622 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
RUBCNQ92622 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RUBCNQ92622 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.14■□□□□ 0.49
RUBCNQ92622 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.14■□□□□ 0.49
RUBCNQ92622 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RUBCNQ92622 AC105917.1-201ENST00000506637 2539 ntBASIC18.14■□□□□ 0.49
RUBCNQ92622 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RUBCNQ92622 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RUBCNQ92622 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RUBCNQ92622 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RUBCNQ92622 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RUBCNQ92622 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUBCNQ92622 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RUBCNQ92622 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RUBCNQ92622 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RUBCNQ92622 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUBCNQ92622 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RUBCNQ92622 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUBCNQ92622 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.13■□□□□ 0.49
RUBCNQ92622 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.13■□□□□ 0.49
RUBCNQ92622 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUBCNQ92622 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUBCNQ92622 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RUBCNQ92622 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.13■□□□□ 0.49
RUBCNQ92622 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RUBCNQ92622 MIR770-201ENST00000390219 98 ntBASIC18.13■□□□□ 0.49
RUBCNQ92622 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.13■□□□□ 0.49
RUBCNQ92622 AC023274.1-201ENST00000418278 595 ntBASIC18.13■□□□□ 0.49
RUBCNQ92622 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.13■□□□□ 0.49
RUBCNQ92622 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.13■□□□□ 0.49
RUBCNQ92622 AC007967.2-201ENST00000432613 625 ntBASIC18.13■□□□□ 0.49
RUBCNQ92622 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.13■□□□□ 0.49
RUBCNQ92622 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.13■□□□□ 0.49
RUBCNQ92622 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.13■□□□□ 0.49
RUBCNQ92622 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
RUBCNQ92622 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.13■□□□□ 0.49
RUBCNQ92622 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.13■□□□□ 0.49
RUBCNQ92622 AC012640.2-201ENST00000561606 901 ntBASIC18.13■□□□□ 0.49
RUBCNQ92622 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.13■□□□□ 0.49
RUBCNQ92622 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUBCNQ92622 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.13■□□□□ 0.49
RUBCNQ92622 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RUBCNQ92622 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUBCNQ92622 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUBCNQ92622 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RUBCNQ92622 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUBCNQ92622 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUBCNQ92622 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.13■□□□□ 0.49
RUBCNQ92622 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RUBCNQ92622 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
RUBCNQ92622 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.12■□□□□ 0.49
RUBCNQ92622 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RUBCNQ92622 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
RUBCNQ92622 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RUBCNQ92622 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RUBCNQ92622 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.12■□□□□ 0.49
RUBCNQ92622 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RUBCNQ92622 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
RUBCNQ92622 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RUBCNQ92622 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RUBCNQ92622 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RUBCNQ92622 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.12■□□□□ 0.49
RUBCNQ92622 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RUBCNQ92622 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.12■□□□□ 0.49
RUBCNQ92622 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.12■□□□□ 0.49
RUBCNQ92622 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RUBCNQ92622 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.12■□□□□ 0.49
RUBCNQ92622 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.12■□□□□ 0.49
RUBCNQ92622 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.12■□□□□ 0.49
RUBCNQ92622 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RUBCNQ92622 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RUBCNQ92622 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RUBCNQ92622 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.12■□□□□ 0.49
RUBCNQ92622 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RUBCNQ92622 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RUBCNQ92622 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms