Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.9■■□□□ 1.1
RTF1Q92541 AC069335.1-201ENST00000489972 472 ntBASIC21.9■■□□□ 1.1
RTF1Q92541 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
RTF1Q92541 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
RTF1Q92541 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.9■■□□□ 1.1
RTF1Q92541 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC21.9■■□□□ 1.1
RTF1Q92541 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC21.9■■□□□ 1.1
RTF1Q92541 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC21.9■■□□□ 1.1
RTF1Q92541 LINC00628-201ENST00000628516 1289 ntBASIC21.9■■□□□ 1.1
RTF1Q92541 AC016027.1-202ENST00000607927 1699 ntBASIC21.9■■□□□ 1.1
RTF1Q92541 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTF1Q92541 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTF1Q92541 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RTF1Q92541 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTF1Q92541 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC21.9■■□□□ 1.1
RTF1Q92541 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.9■■□□□ 1.1
RTF1Q92541 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
RTF1Q92541 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.89■■□□□ 1.1
RTF1Q92541 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
RTF1Q92541 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RTF1Q92541 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RTF1Q92541 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RTF1Q92541 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
RTF1Q92541 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RTF1Q92541 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
RTF1Q92541 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.89■■□□□ 1.1
RTF1Q92541 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC21.89■■□□□ 1.1
RTF1Q92541 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTF1Q92541 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
RTF1Q92541 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
RTF1Q92541 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
RTF1Q92541 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTF1Q92541 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RTF1Q92541 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RTF1Q92541 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTF1Q92541 KRT18P32-201ENST00000424695 1287 ntBASIC21.89■■□□□ 1.09
RTF1Q92541 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC21.89■■□□□ 1.09
RTF1Q92541 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RTF1Q92541 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.89■■□□□ 1.09
RTF1Q92541 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC21.89■■□□□ 1.09
RTF1Q92541 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.89■■□□□ 1.09
RTF1Q92541 AC025678.2-201ENST00000562061 970 ntBASIC21.89■■□□□ 1.09
RTF1Q92541 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
RTF1Q92541 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.89■■□□□ 1.09
RTF1Q92541 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC21.89■■□□□ 1.09
RTF1Q92541 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTF1Q92541 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RTF1Q92541 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RTF1Q92541 AC106820.2-201ENST00000563775 3264 ntBASIC21.89■■□□□ 1.09
RTF1Q92541 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTF1Q92541 PCDHB17P-201ENST00000539533 2393 ntBASIC21.89■■□□□ 1.09
RTF1Q92541 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTF1Q92541 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTF1Q92541 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.89■■□□□ 1.09
RTF1Q92541 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
RTF1Q92541 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
RTF1Q92541 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTF1Q92541 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RTF1Q92541 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTF1Q92541 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC21.88■■□□□ 1.09
RTF1Q92541 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.88■■□□□ 1.09
RTF1Q92541 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
RTF1Q92541 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC21.88■■□□□ 1.09
RTF1Q92541 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTF1Q92541 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTF1Q92541 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RTF1Q92541 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
RTF1Q92541 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTF1Q92541 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTF1Q92541 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTF1Q92541 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.88■■□□□ 1.09
RTF1Q92541 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC21.88■■□□□ 1.09
RTF1Q92541 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC21.88■■□□□ 1.09
RTF1Q92541 WDR53-204ENST00000433160 887 ntTSL 5 BASIC21.88■■□□□ 1.09
RTF1Q92541 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.88■■□□□ 1.09
RTF1Q92541 CYMP-203ENST00000474680 1263 ntBASIC21.88■■□□□ 1.09
RTF1Q92541 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.88■■□□□ 1.09
RTF1Q92541 AC109322.1-201ENST00000524499 1264 ntBASIC21.88■■□□□ 1.09
RTF1Q92541 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC21.88■■□□□ 1.09
RTF1Q92541 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC21.88■■□□□ 1.09
RTF1Q92541 AC013467.2-201ENST00000605472 835 ntBASIC21.88■■□□□ 1.09
RTF1Q92541 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC21.88■■□□□ 1.09
RTF1Q92541 AC106028.4-201ENST00000614509 607 ntBASIC21.88■■□□□ 1.09
RTF1Q92541 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.88■■□□□ 1.09
RTF1Q92541 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC21.88■■□□□ 1.09
RTF1Q92541 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.88■■□□□ 1.09
RTF1Q92541 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RTF1Q92541 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RTF1Q92541 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTF1Q92541 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTF1Q92541 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RTF1Q92541 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.88■■□□□ 1.09
RTF1Q92541 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTF1Q92541 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RTF1Q92541 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTF1Q92541 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTF1Q92541 UXT-AS1-201ENST00000590504 1525 ntBASIC21.87■■□□□ 1.09
RTF1Q92541 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC21.87■■□□□ 1.09
RTF1Q92541 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTF1Q92541 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms