Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 MIR574-201ENST00000385209 96 ntBASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 AC116407.3-201ENST00000623905 1129 ntBASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 AL662844.4-201ENST00000606367 2838 ntBASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 AL512652.2-201ENST00000625156 1716 ntBASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 MRPL20P1-201ENST00000400819 433 ntBASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 AL353732.1-201ENST00000569618 1459 ntBASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDH19Q8TAB3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 AC098831.1-202ENST00000438821 336 ntBASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms