Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 AP002414.1-201ENST00000391405 1147 ntBASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 NUS1P2-201ENST00000417358 873 ntBASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 PRYP5-201ENST00000451909 266 ntBASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 HLA-J-202ENST00000469281 1241 ntBASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 AC091076.1-201ENST00000610741 619 ntBASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 AC018695.7-201ENST00000624587 2492 ntBASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 AC004817.3-201ENST00000602957 2129 ntBASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS37AQ8NEZ2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 LINC00895-201ENST00000629028 1637 ntBASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 KRT8P49-201ENST00000604166 1432 ntBASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 AC006449.5-201ENST00000610658 2098 ntBASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.09■□□□□ 0.17
VPS37AQ8NEZ2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.08■□□□□ 0.17
VPS37AQ8NEZ2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
VPS37AQ8NEZ2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.08■□□□□ 0.17
VPS37AQ8NEZ2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
VPS37AQ8NEZ2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
VPS37AQ8NEZ2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
VPS37AQ8NEZ2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
VPS37AQ8NEZ2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 ATP5G2P1-201ENST00000433580 426 ntBASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms