Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AL671710.1-201ENST00000610245 2349 ntBASIC25.94■■□□□ 1.74
CFAP43Q8NDM7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CFAP43Q8NDM7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CFAP43Q8NDM7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CFAP43Q8NDM7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
CFAP43Q8NDM7 GGT4P-201ENST00000623672 1708 ntBASIC25.94■■□□□ 1.74
CFAP43Q8NDM7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 RAB43P1-201ENST00000561790 589 ntBASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 AC084346.2-201ENST00000607097 949 ntBASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CFAP43Q8NDM7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC25.92■■□□□ 1.74
CFAP43Q8NDM7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CFAP43Q8NDM7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC25.92■■□□□ 1.74
CFAP43Q8NDM7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CFAP43Q8NDM7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CFAP43Q8NDM7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
CFAP43Q8NDM7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC25.92■■□□□ 1.74
CFAP43Q8NDM7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
CFAP43Q8NDM7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CFAP43Q8NDM7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
CFAP43Q8NDM7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
CFAP43Q8NDM7 TTTY23B-201ENST00000442790 549 ntBASIC25.92■■□□□ 1.74
CFAP43Q8NDM7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
CFAP43Q8NDM7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
CFAP43Q8NDM7 AL139011.1-202ENST00000642063 584 ntBASIC25.92■■□□□ 1.74
CFAP43Q8NDM7 AL035456.1-201ENST00000456064 1369 ntBASIC25.92■■□□□ 1.74
CFAP43Q8NDM7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
CFAP43Q8NDM7 AC007541.1-201ENST00000570282 1469 ntBASIC25.92■■□□□ 1.74
CFAP43Q8NDM7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC25.92■■□□□ 1.74
CFAP43Q8NDM7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CFAP43Q8NDM7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 BTBD7P1-201ENST00000447253 1453 ntBASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 SLC7A15P-201ENST00000424028 1363 ntBASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 FAM86MP-201ENST00000340703 885 ntBASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 AC008494.3-201ENST00000606615 944 ntBASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CFAP43Q8NDM7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 HLA-H-201ENST00000383620 1096 ntBASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC25.9■■□□□ 1.74
CFAP43Q8NDM7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CFAP43Q8NDM7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms