Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 AL133215.2-201ENST00000609242 977 ntBASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 GPAA1P2-201ENST00000417923 928 ntBASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 KRT43P-201ENST00000434019 910 ntBASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.95□□□□□ -0.18
CCDC168Q8NDH2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 AC006538.1-201ENST00000567905 1585 ntBASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 KRT8P13-201ENST00000463294 1010 ntBASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 AC131009.4-201ENST00000624048 1740 ntBASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.94□□□□□ -0.18
CCDC168Q8NDH2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 FAM21FP-201ENST00000426241 1131 ntBASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 AC244093.1-201ENST00000610837 814 ntBASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 AC106872.11-201ENST00000605838 421 ntBASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CCDC168Q8NDH2 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms