Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 TOP3BP1-201ENST00000420768 1380 ntBASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 AC025062.2-201ENST00000605477 670 ntBASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 AC092171.3-201ENST00000610122 2651 ntBASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LSMEM1Q8N8F7 AC006277.1-201ENST00000624348 1610 ntBASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 AF238378.1-201ENST00000526806 358 ntBASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
LSMEM1Q8N8F7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
LSMEM1Q8N8F7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LSMEM1Q8N8F7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.45■□□□□ 0.06
LSMEM1Q8N8F7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSMEM1Q8N8F7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
LSMEM1Q8N8F7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LSMEM1Q8N8F7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
LSMEM1Q8N8F7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSMEM1Q8N8F7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LSMEM1Q8N8F7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSMEM1Q8N8F7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSMEM1Q8N8F7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
LSMEM1Q8N8F7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSMEM1Q8N8F7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSMEM1Q8N8F7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
LSMEM1Q8N8F7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
LSMEM1Q8N8F7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
LSMEM1Q8N8F7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSMEM1Q8N8F7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.45■□□□□ 0.06
LSMEM1Q8N8F7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LSMEM1Q8N8F7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms