Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 AL355312.1-201ENST00000407115 2176 ntBASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 GPR53P-205ENST00000457298 1084 ntBASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 AC100757.3-201ENST00000622361 1406 ntBASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RP1L1Q8IWN7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 AC007613.1-201ENST00000572811 2597 ntBASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 SPDYE14P-201ENST00000442619 822 ntBASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 MIR4515-201ENST00000584082 81 ntBASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 TP53TG3HP-202ENST00000569755 579 ntBASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RP1L1Q8IWN7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 NFIC-211ENST00000641145 8399 ntBASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 SPTLC1P1-201ENST00000447199 261 ntBASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 AC107918.2-201ENST00000530817 355 ntBASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 LINC00304-203ENST00000565008 1864 ntBASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms