Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CCDC83Q8IWF9 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 PTCHD3P3-201ENST00000403073 906 ntBASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 AC013467.2-201ENST00000605472 835 ntBASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 AC025062.2-201ENST00000605477 670 ntBASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 PCDHA1-201ENST00000378133 2726 ntBASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC83Q8IWF9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 HLA-J-202ENST00000469281 1241 ntBASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 AF238378.1-201ENST00000526806 358 ntBASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 SNX33P1-201ENST00000592116 1762 ntBASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC83Q8IWF9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC83Q8IWF9 AC006504.4-201ENST00000592118 1568 ntBASIC19.78■□□□□ 0.76
CCDC83Q8IWF9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC83Q8IWF9 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC83Q8IWF9 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC83Q8IWF9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC83Q8IWF9 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC83Q8IWF9 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC83Q8IWF9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC83Q8IWF9 AL671710.1-201ENST00000610245 2349 ntBASIC19.78■□□□□ 0.76
CCDC83Q8IWF9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.78■□□□□ 0.76
CCDC83Q8IWF9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC83Q8IWF9 ELK2BP-201ENST00000415014 1224 ntBASIC19.78■□□□□ 0.76
CCDC83Q8IWF9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC83Q8IWF9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC83Q8IWF9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms