Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.16■□□□□ 0.5
HERC6Q8IVU3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HERC6Q8IVU3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.16■□□□□ 0.5
HERC6Q8IVU3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.16■□□□□ 0.5
HERC6Q8IVU3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.16■□□□□ 0.5
HERC6Q8IVU3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.16■□□□□ 0.5
HERC6Q8IVU3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HERC6Q8IVU3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HERC6Q8IVU3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HERC6Q8IVU3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.16■□□□□ 0.5
HERC6Q8IVU3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
HERC6Q8IVU3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
HERC6Q8IVU3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HERC6Q8IVU3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 SLC22A20-204ENST00000530038 1673 ntBASIC18.15■□□□□ 0.5
HERC6Q8IVU3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 AC142381.1-201ENST00000426099 345 ntBASIC18.15■□□□□ 0.5
HERC6Q8IVU3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 AC091167.2-201ENST00000579581 588 ntBASIC18.15■□□□□ 0.5
HERC6Q8IVU3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 AC007967.4-201ENST00000614700 386 ntBASIC18.15■□□□□ 0.5
HERC6Q8IVU3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC6Q8IVU3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HERC6Q8IVU3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
HERC6Q8IVU3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HERC6Q8IVU3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 GPR53P-205ENST00000457298 1084 ntBASIC18.14■□□□□ 0.49
HERC6Q8IVU3 HLA-V-204ENST00000476601 1289 ntBASIC18.14■□□□□ 0.49
HERC6Q8IVU3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 TP53TG3HP-202ENST00000569755 579 ntBASIC18.14■□□□□ 0.49
HERC6Q8IVU3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.14■□□□□ 0.49
HERC6Q8IVU3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.14■□□□□ 0.49
HERC6Q8IVU3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 AP3S2-216ENST00000617003 1561 ntBASIC18.13■□□□□ 0.49
HERC6Q8IVU3 OR6D1P-202ENST00000641007 5290 ntBASIC18.13■□□□□ 0.49
HERC6Q8IVU3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 AC022494.1-201ENST00000466044 728 ntBASIC18.13■□□□□ 0.49
HERC6Q8IVU3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 IGHV3-71-201ENST00000523324 359 ntBASIC18.13■□□□□ 0.49
HERC6Q8IVU3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
HERC6Q8IVU3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms