Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 AC009477.1-201ENST00000452936 217 ntBASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
OTOP1Q7RTM1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 AC139713.2-201ENST00000641328 2723 ntBASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 AL512384.1-201ENST00000406683 331 ntBASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 AC112492.5-201ENST00000421897 457 ntBASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
OTOP1Q7RTM1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
OTOP1Q7RTM1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.34■□□□□ 0.69
OTOP1Q7RTM1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
OTOP1Q7RTM1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
OTOP1Q7RTM1 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
OTOP1Q7RTM1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
OTOP1Q7RTM1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
OTOP1Q7RTM1 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
OTOP1Q7RTM1 DGCR5-201ENST00000399539 862 ntBASIC19.34■□□□□ 0.69
OTOP1Q7RTM1 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
OTOP1Q7RTM1 AC132938.2-201ENST00000579188 680 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms