Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHFQ7M4L6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHFQ7M4L6 AC068418.2-201ENST00000577309 3703 ntBASIC15.28■□□□□ 0.04
SHFQ7M4L6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHFQ7M4L6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHFQ7M4L6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHFQ7M4L6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHFQ7M4L6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHFQ7M4L6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHFQ7M4L6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHFQ7M4L6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHFQ7M4L6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHFQ7M4L6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHFQ7M4L6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHFQ7M4L6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHFQ7M4L6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHFQ7M4L6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 RCN1P1-201ENST00000400413 996 ntBASIC15.28■□□□□ 0.04
SHFQ7M4L6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 CHCHD2P8-201ENST00000429873 447 ntBASIC15.28■□□□□ 0.04
SHFQ7M4L6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 AL121956.5-201ENST00000625261 221 ntBASIC15.28■□□□□ 0.04
SHFQ7M4L6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHFQ7M4L6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHFQ7M4L6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHFQ7M4L6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SHFQ7M4L6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SHFQ7M4L6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHFQ7M4L6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SHFQ7M4L6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.27■□□□□ 0.04
SHFQ7M4L6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHFQ7M4L6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHFQ7M4L6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.27■□□□□ 0.04
SHFQ7M4L6 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHFQ7M4L6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHFQ7M4L6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHFQ7M4L6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHFQ7M4L6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHFQ7M4L6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHFQ7M4L6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.27■□□□□ 0.04
SHFQ7M4L6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHFQ7M4L6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHFQ7M4L6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHFQ7M4L6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHFQ7M4L6 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.27■□□□□ 0.04
SHFQ7M4L6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SHFQ7M4L6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.27■□□□□ 0.04
SHFQ7M4L6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.27■□□□□ 0.04
SHFQ7M4L6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.27■□□□□ 0.04
SHFQ7M4L6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.27■□□□□ 0.04
SHFQ7M4L6 AC011467.2-201ENST00000598425 242 ntBASIC15.27■□□□□ 0.04
SHFQ7M4L6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHFQ7M4L6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.27■□□□□ 0.04
SHFQ7M4L6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.27■□□□□ 0.04
SHFQ7M4L6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.27■□□□□ 0.04
SHFQ7M4L6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.27■□□□□ 0.03
SHFQ7M4L6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SHFQ7M4L6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHFQ7M4L6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SHFQ7M4L6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SHFQ7M4L6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHFQ7M4L6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.27■□□□□ 0.03
SHFQ7M4L6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.27■□□□□ 0.03
SHFQ7M4L6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHFQ7M4L6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.27■□□□□ 0.03
SHFQ7M4L6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHFQ7M4L6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.27■□□□□ 0.03
SHFQ7M4L6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHFQ7M4L6 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHFQ7M4L6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.27■□□□□ 0.03
SHFQ7M4L6 AC132938.5-201ENST00000624980 1813 ntBASIC15.27■□□□□ 0.03
SHFQ7M4L6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SHFQ7M4L6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.26■□□□□ 0.03
SHFQ7M4L6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.26■□□□□ 0.03
SHFQ7M4L6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHFQ7M4L6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms