Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 NOC2LP2-201ENST00000407594 1944 ntBASIC25.07■■□□□ 1.6
CDC42BPAQ5VT25 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 AL023806.1-201ENST00000603994 1649 ntBASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 AC092337.1-201ENST00000568699 1129 ntBASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 AC004461.2-201ENST00000629517 803 ntBASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42BPAQ5VT25 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
CDC42BPAQ5VT25 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC25.05■■□□□ 1.6
CDC42BPAQ5VT25 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDC42BPAQ5VT25 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CDC42BPAQ5VT25 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDC42BPAQ5VT25 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDC42BPAQ5VT25 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC25.05■■□□□ 1.6
CDC42BPAQ5VT25 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC25.05■■□□□ 1.6
CDC42BPAQ5VT25 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC25.05■■□□□ 1.6
CDC42BPAQ5VT25 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CDC42BPAQ5VT25 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC25.05■■□□□ 1.6
CDC42BPAQ5VT25 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC25.05■■□□□ 1.6
CDC42BPAQ5VT25 APOC4-201ENST00000591600 348 ntTSL 3 BASIC25.05■■□□□ 1.6
CDC42BPAQ5VT25 AL391069.4-201ENST00000609583 481 ntBASIC25.05■■□□□ 1.6
CDC42BPAQ5VT25 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC25.05■■□□□ 1.6
CDC42BPAQ5VT25 GPAA1P2-202ENST00000606848 1787 ntBASIC25.05■■□□□ 1.6
CDC42BPAQ5VT25 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDC42BPAQ5VT25 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
CDC42BPAQ5VT25 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 AC112492.5-201ENST00000421897 457 ntBASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 SERBP1P3-201ENST00000459980 809 ntBASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42BPAQ5VT25 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 AC098614.1-201ENST00000368528 745 ntBASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 TTTY23B-201ENST00000442790 549 ntBASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 DOC2GP-202ENST00000514950 1163 ntBASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 AL589702.1-201ENST00000641229 1509 ntBASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 AL512652.2-201ENST00000625156 1716 ntBASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CDC42BPAQ5VT25 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms