Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.9□□□□□ -0.02
NKX6-1P78426 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-1P78426 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-1P78426 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-1P78426 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.9□□□□□ -0.02
NKX6-1P78426 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-1P78426 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
NKX6-1P78426 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-1P78426 AC244107.1-201ENST00000442033 332 ntBASIC14.9□□□□□ -0.02
NKX6-1P78426 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.9□□□□□ -0.02
NKX6-1P78426 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.9□□□□□ -0.02
NKX6-1P78426 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-1P78426 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.9□□□□□ -0.02
NKX6-1P78426 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
NKX6-1P78426 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NKX6-1P78426 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-1P78426 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-1P78426 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.9□□□□□ -0.02
NKX6-1P78426 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NKX6-1P78426 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.9□□□□□ -0.02
NKX6-1P78426 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
NKX6-1P78426 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NKX6-1P78426 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.9□□□□□ -0.02
NKX6-1P78426 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-1P78426 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-1P78426 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-1P78426 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.9□□□□□ -0.02
NKX6-1P78426 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
NKX6-1P78426 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-1P78426 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-1P78426 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NKX6-1P78426 AL513477.1-201ENST00000602865 2407 ntBASIC14.9□□□□□ -0.02
NKX6-1P78426 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-1P78426 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.89□□□□□ -0.03
NKX6-1P78426 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-1P78426 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-1P78426 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NKX6-1P78426 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
NKX6-1P78426 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-1P78426 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-1P78426 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
NKX6-1P78426 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.89□□□□□ -0.03
NKX6-1P78426 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NKX6-1P78426 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NKX6-1P78426 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-1P78426 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-1P78426 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.89□□□□□ -0.03
NKX6-1P78426 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-1P78426 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-1P78426 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.89□□□□□ -0.03
NKX6-1P78426 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-1P78426 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-1P78426 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-1P78426 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-1P78426 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NKX6-1P78426 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-1P78426 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-1P78426 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-1P78426 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NKX6-1P78426 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-1P78426 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-1P78426 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NKX6-1P78426 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX6-1P78426 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NKX6-1P78426 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NKX6-1P78426 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NKX6-1P78426 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX6-1P78426 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NKX6-1P78426 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX6-1P78426 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.88□□□□□ -0.03
NKX6-1P78426 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
NKX6-1P78426 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.88□□□□□ -0.03
NKX6-1P78426 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 AC108073.2-201ENST00000464002 357 ntBASIC14.88□□□□□ -0.03
NKX6-1P78426 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.88□□□□□ -0.03
NKX6-1P78426 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.88□□□□□ -0.03
NKX6-1P78426 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.88□□□□□ -0.03
NKX6-1P78426 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX6-1P78426 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.88□□□□□ -0.03
NKX6-1P78426 AC239800.4-201ENST00000603712 296 ntBASIC14.88□□□□□ -0.03
NKX6-1P78426 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.88□□□□□ -0.03
NKX6-1P78426 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NKX6-1P78426 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NKX6-1P78426 AL138688.1-201ENST00000624851 1594 ntBASIC14.88□□□□□ -0.03
NKX6-1P78426 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NKX6-1P78426 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NKX6-1P78426 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms