Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ASIC1P78348 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ASIC1P78348 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ASIC1P78348 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.81■□□□□ 0.6
ASIC1P78348 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ASIC1P78348 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ASIC1P78348 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ASIC1P78348 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ASIC1P78348 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ASIC1P78348 PCDHB19P-201ENST00000570871 2371 ntBASIC18.81■□□□□ 0.6
ASIC1P78348 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.81■□□□□ 0.6
ASIC1P78348 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.81■□□□□ 0.6
ASIC1P78348 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.81■□□□□ 0.6
ASIC1P78348 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.81■□□□□ 0.6
ASIC1P78348 FAAHP1-202ENST00000446499 1238 ntBASIC18.81■□□□□ 0.6
ASIC1P78348 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.81■□□□□ 0.6
ASIC1P78348 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.81■□□□□ 0.6
ASIC1P78348 KRT126P-201ENST00000549467 1181 ntBASIC18.81■□□□□ 0.6
ASIC1P78348 AL356488.2-201ENST00000602755 427 ntBASIC18.81■□□□□ 0.6
ASIC1P78348 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ASIC1P78348 REXO1L3P-201ENST00000622202 1288 ntBASIC18.81■□□□□ 0.6
ASIC1P78348 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.81■□□□□ 0.6
ASIC1P78348 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ASIC1P78348 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ASIC1P78348 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.81■□□□□ 0.6
ASIC1P78348 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
ASIC1P78348 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
ASIC1P78348 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ASIC1P78348 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ASIC1P78348 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
ASIC1P78348 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ASIC1P78348 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ASIC1P78348 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.81■□□□□ 0.6
ASIC1P78348 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.81■□□□□ 0.6
ASIC1P78348 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ASIC1P78348 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ASIC1P78348 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ASIC1P78348 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ASIC1P78348 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ASIC1P78348 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ASIC1P78348 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ASIC1P78348 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ASIC1P78348 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ASIC1P78348 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ASIC1P78348 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ASIC1P78348 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ASIC1P78348 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.8■□□□□ 0.6
ASIC1P78348 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.8■□□□□ 0.6
ASIC1P78348 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.8■□□□□ 0.6
ASIC1P78348 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.8■□□□□ 0.6
ASIC1P78348 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.8■□□□□ 0.6
ASIC1P78348 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.8■□□□□ 0.6
ASIC1P78348 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.8■□□□□ 0.6
ASIC1P78348 FAM215A-202ENST00000632077 792 ntBASIC18.8■□□□□ 0.6
ASIC1P78348 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ASIC1P78348 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.8■□□□□ 0.6
ASIC1P78348 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
ASIC1P78348 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.8■□□□□ 0.6
ASIC1P78348 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ASIC1P78348 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ASIC1P78348 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
ASIC1P78348 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.79■□□□□ 0.6
ASIC1P78348 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ASIC1P78348 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ASIC1P78348 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ASIC1P78348 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ASIC1P78348 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ASIC1P78348 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ASIC1P78348 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ASIC1P78348 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ASIC1P78348 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ASIC1P78348 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ASIC1P78348 AP002469.2-201ENST00000531724 424 ntBASIC18.79■□□□□ 0.6
ASIC1P78348 AC013467.2-201ENST00000605472 835 ntBASIC18.79■□□□□ 0.6
ASIC1P78348 GGTLC5P-201ENST00000617623 998 ntBASIC18.79■□□□□ 0.6
ASIC1P78348 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.79■□□□□ 0.6
ASIC1P78348 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ASIC1P78348 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ASIC1P78348 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ASIC1P78348 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.79■□□□□ 0.6
ASIC1P78348 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ASIC1P78348 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ASIC1P78348 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.79■□□□□ 0.6
ASIC1P78348 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.79■□□□□ 0.6
ASIC1P78348 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
ASIC1P78348 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ASIC1P78348 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ASIC1P78348 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ASIC1P78348 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.79■□□□□ 0.6
ASIC1P78348 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ASIC1P78348 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ASIC1P78348 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ASIC1P78348 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.79■□□□□ 0.6
ASIC1P78348 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ASIC1P78348 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.78■□□□□ 0.6
ASIC1P78348 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.78■□□□□ 0.6
ASIC1P78348 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
ASIC1P78348 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ASIC1P78348 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ASIC1P78348 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms