Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC11.96□□□□□ -0.49
RPL39P62891 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC11.96□□□□□ -0.49
RPL39P62891 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC11.96□□□□□ -0.49
RPL39P62891 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC11.96□□□□□ -0.49
RPL39P62891 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
RPL39P62891 SNORA78-201ENST00000459373 127 ntBASIC11.96□□□□□ -0.49
RPL39P62891 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC11.96□□□□□ -0.49
RPL39P62891 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
RPL39P62891 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC11.96□□□□□ -0.49
RPL39P62891 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC11.96□□□□□ -0.49
RPL39P62891 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC11.96□□□□□ -0.49
RPL39P62891 NAA38-203ENST00000575071 553 ntTSL 2 BASIC11.96□□□□□ -0.49
RPL39P62891 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC11.96□□□□□ -0.49
RPL39P62891 AC140113.3-201ENST00000605663 199 ntBASIC11.96□□□□□ -0.49
RPL39P62891 CLN6-221ENST00000637494 765 ntTSL 5 BASIC11.96□□□□□ -0.49
RPL39P62891 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC11.96□□□□□ -0.49
RPL39P62891 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RPL39P62891 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RPL39P62891 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
RPL39P62891 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RPL39P62891 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
RPL39P62891 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
RPL39P62891 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC11.96□□□□□ -0.5
RPL39P62891 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RPL39P62891 AC006538.1-201ENST00000567905 1585 ntBASIC11.96□□□□□ -0.5
RPL39P62891 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RPL39P62891 FUT8-AS1-201ENST00000621019 1521 ntBASIC11.96□□□□□ -0.5
RPL39P62891 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RPL39P62891 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.95□□□□□ -0.5
RPL39P62891 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
RPL39P62891 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
RPL39P62891 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
RPL39P62891 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
RPL39P62891 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 KRT8P10-201ENST00000450021 1447 ntBASIC11.95□□□□□ -0.5
RPL39P62891 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC11.95□□□□□ -0.5
RPL39P62891 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC11.95□□□□□ -0.5
RPL39P62891 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
RPL39P62891 AC104640.1-201ENST00000562617 2109 ntBASIC11.95□□□□□ -0.5
RPL39P62891 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
RPL39P62891 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC11.95□□□□□ -0.5
RPL39P62891 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
RPL39P62891 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC11.95□□□□□ -0.5
RPL39P62891 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
RPL39P62891 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC11.95□□□□□ -0.5
RPL39P62891 SPDYE15P-201ENST00000424157 909 ntBASIC11.95□□□□□ -0.5
RPL39P62891 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC11.95□□□□□ -0.5
RPL39P62891 TSPY15P-201ENST00000457163 923 ntBASIC11.95□□□□□ -0.5
RPL39P62891 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC11.95□□□□□ -0.5
RPL39P62891 STK25P1-201ENST00000585406 838 ntBASIC11.95□□□□□ -0.5
RPL39P62891 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 FES-204ENST00000414248 2327 ntTSL 2 BASIC11.95□□□□□ -0.5
RPL39P62891 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
RPL39P62891 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
RPL39P62891 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
RPL39P62891 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.95□□□□□ -0.5
RPL39P62891 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
RPL39P62891 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RPL39P62891 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms