Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2NP61088 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2NP61088 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.82□□□□□ -0.04
UBE2NP61088 AL645608.8-201ENST00000606034 2086 ntBASIC14.82□□□□□ -0.04
UBE2NP61088 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2NP61088 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2NP61088 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.82□□□□□ -0.04
UBE2NP61088 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.82□□□□□ -0.04
UBE2NP61088 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.82□□□□□ -0.04
UBE2NP61088 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
UBE2NP61088 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2NP61088 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.82□□□□□ -0.04
UBE2NP61088 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.82□□□□□ -0.04
UBE2NP61088 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.82□□□□□ -0.04
UBE2NP61088 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.82□□□□□ -0.04
UBE2NP61088 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.82□□□□□ -0.04
UBE2NP61088 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.82□□□□□ -0.04
UBE2NP61088 AC018845.2-201ENST00000568326 409 ntBASIC14.82□□□□□ -0.04
UBE2NP61088 AC005412.3-201ENST00000580309 715 ntBASIC14.82□□□□□ -0.04
UBE2NP61088 AC023141.13-201ENST00000604991 943 ntBASIC14.82□□□□□ -0.04
UBE2NP61088 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.82□□□□□ -0.04
UBE2NP61088 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.82□□□□□ -0.04
UBE2NP61088 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.82□□□□□ -0.04
UBE2NP61088 AC010507.1-201ENST00000633895 436 ntBASIC14.82□□□□□ -0.04
UBE2NP61088 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.82□□□□□ -0.04
UBE2NP61088 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2NP61088 TOP3BP1-201ENST00000420768 1380 ntBASIC14.82□□□□□ -0.04
UBE2NP61088 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2NP61088 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2NP61088 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2NP61088 AC092053.1-201ENST00000605787 1936 ntBASIC14.82□□□□□ -0.04
UBE2NP61088 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.82□□□□□ -0.04
UBE2NP61088 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2NP61088 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2NP61088 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.82□□□□□ -0.04
UBE2NP61088 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.82□□□□□ -0.04
UBE2NP61088 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
UBE2NP61088 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 AC108860.2-201ENST00000562760 2183 ntBASIC14.81□□□□□ -0.04
UBE2NP61088 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
UBE2NP61088 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.81□□□□□ -0.04
UBE2NP61088 IGLL3P-201ENST00000412472 434 ntBASIC14.81□□□□□ -0.04
UBE2NP61088 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.81□□□□□ -0.04
UBE2NP61088 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.81□□□□□ -0.04
UBE2NP61088 FAM185BP-201ENST00000443595 716 ntBASIC14.81□□□□□ -0.04
UBE2NP61088 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.81□□□□□ -0.04
UBE2NP61088 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.81□□□□□ -0.04
UBE2NP61088 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
UBE2NP61088 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.81□□□□□ -0.04
UBE2NP61088 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
UBE2NP61088 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.81□□□□□ -0.04
UBE2NP61088 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.81□□□□□ -0.04
UBE2NP61088 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 BCAR1-209ENST00000546196 1340 ntBASIC14.81□□□□□ -0.04
UBE2NP61088 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
UBE2NP61088 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 KRT8P49-201ENST00000604166 1432 ntBASIC14.81□□□□□ -0.04
UBE2NP61088 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
UBE2NP61088 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
UBE2NP61088 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
UBE2NP61088 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
UBE2NP61088 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.81□□□□□ -0.04
UBE2NP61088 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2NP61088 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBE2NP61088 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.8□□□□□ -0.04
UBE2NP61088 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
UBE2NP61088 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.8□□□□□ -0.04
UBE2NP61088 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBE2NP61088 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBE2NP61088 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.8□□□□□ -0.04
UBE2NP61088 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBE2NP61088 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBE2NP61088 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.8□□□□□ -0.04
UBE2NP61088 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBE2NP61088 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
UBE2NP61088 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
UBE2NP61088 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBE2NP61088 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms