Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 KRT18P38-201ENST00000449496 1282 ntBASIC15.39■□□□□ 0.05
CXCR4P61073 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 HOMER2P1-201ENST00000455653 964 ntBASIC15.39■□□□□ 0.05
CXCR4P61073 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.39■□□□□ 0.05
CXCR4P61073 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
CXCR4P61073 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
CXCR4P61073 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.39■□□□□ 0.05
CXCR4P61073 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CXCR4P61073 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CXCR4P61073 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 AL136379.1-201ENST00000623471 2642 ntBASIC15.39■□□□□ 0.05
CXCR4P61073 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CXCR4P61073 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.39■□□□□ 0.05
CXCR4P61073 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.39■□□□□ 0.05
CXCR4P61073 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.39■□□□□ 0.05
CXCR4P61073 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.39■□□□□ 0.05
CXCR4P61073 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.39■□□□□ 0.05
CXCR4P61073 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
CXCR4P61073 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
CXCR4P61073 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CXCR4P61073 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
CXCR4P61073 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.38■□□□□ 0.05
CXCR4P61073 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CXCR4P61073 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CXCR4P61073 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.38■□□□□ 0.05
CXCR4P61073 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CXCR4P61073 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.38■□□□□ 0.05
CXCR4P61073 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.38■□□□□ 0.05
CXCR4P61073 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.38■□□□□ 0.05
CXCR4P61073 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.38■□□□□ 0.05
CXCR4P61073 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CXCR4P61073 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 TSPY5P-201ENST00000426936 936 ntBASIC15.38■□□□□ 0.05
CXCR4P61073 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 AC007967.3-201ENST00000434308 558 ntBASIC15.38■□□□□ 0.05
CXCR4P61073 RNF126P1-202ENST00000569893 925 ntBASIC15.38■□□□□ 0.05
CXCR4P61073 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.38■□□□□ 0.05
CXCR4P61073 AC133561.5-201ENST00000635547 218 ntBASIC15.38■□□□□ 0.05
CXCR4P61073 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CXCR4P61073 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.38■□□□□ 0.05
CXCR4P61073 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.38■□□□□ 0.05
CXCR4P61073 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.38■□□□□ 0.05
CXCR4P61073 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.38■□□□□ 0.05
CXCR4P61073 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CXCR4P61073 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.38■□□□□ 0.05
CXCR4P61073 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CXCR4P61073 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CXCR4P61073 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCR4P61073 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CXCR4P61073 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CXCR4P61073 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CXCR4P61073 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CXCR4P61073 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.37■□□□□ 0.05
CXCR4P61073 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CXCR4P61073 GGT4P-201ENST00000623672 1708 ntBASIC15.37■□□□□ 0.05
CXCR4P61073 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CXCR4P61073 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CXCR4P61073 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.37■□□□□ 0.05
CXCR4P61073 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CXCR4P61073 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.37■□□□□ 0.05
CXCR4P61073 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CXCR4P61073 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CXCR4P61073 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CXCR4P61073 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CXCR4P61073 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.37■□□□□ 0.05
CXCR4P61073 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CXCR4P61073 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms