Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.78□□□□□ -0.2
SPCS3P61009 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SPCS3P61009 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SPCS3P61009 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.78□□□□□ -0.2
SPCS3P61009 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.78□□□□□ -0.2
SPCS3P61009 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.78□□□□□ -0.2
SPCS3P61009 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS3P61009 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SPCS3P61009 CICP13-201ENST00000422015 2789 ntBASIC13.77□□□□□ -0.2
SPCS3P61009 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.77□□□□□ -0.2
SPCS3P61009 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SPCS3P61009 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SPCS3P61009 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SPCS3P61009 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
SPCS3P61009 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SPCS3P61009 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SPCS3P61009 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPCS3P61009 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPCS3P61009 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.77□□□□□ -0.21
SPCS3P61009 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.77□□□□□ -0.21
SPCS3P61009 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SPCS3P61009 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
SPCS3P61009 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.77□□□□□ -0.21
SPCS3P61009 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.77□□□□□ -0.21
SPCS3P61009 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.77□□□□□ -0.21
SPCS3P61009 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SPCS3P61009 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SPCS3P61009 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.77□□□□□ -0.21
SPCS3P61009 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SPCS3P61009 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.77□□□□□ -0.21
SPCS3P61009 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPCS3P61009 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.77□□□□□ -0.21
SPCS3P61009 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SPCS3P61009 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.77□□□□□ -0.21
SPCS3P61009 AC090616.6-201ENST00000582640 721 ntBASIC13.77□□□□□ -0.21
SPCS3P61009 AL592071.1-201ENST00000611956 408 ntBASIC13.77□□□□□ -0.21
SPCS3P61009 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
SPCS3P61009 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.77□□□□□ -0.21
SPCS3P61009 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.77□□□□□ -0.21
SPCS3P61009 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.77□□□□□ -0.21
SPCS3P61009 AC007326.2-201ENST00000624224 7579 ntBASIC13.77□□□□□ -0.21
SPCS3P61009 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPCS3P61009 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SPCS3P61009 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPCS3P61009 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPCS3P61009 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPCS3P61009 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.77□□□□□ -0.21
SPCS3P61009 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.77□□□□□ -0.21
SPCS3P61009 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPCS3P61009 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPCS3P61009 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPCS3P61009 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.76□□□□□ -0.21
SPCS3P61009 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SPCS3P61009 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.76□□□□□ -0.21
SPCS3P61009 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SPCS3P61009 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SPCS3P61009 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPCS3P61009 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SPCS3P61009 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SPCS3P61009 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SPCS3P61009 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPCS3P61009 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPCS3P61009 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.76□□□□□ -0.21
SPCS3P61009 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SPCS3P61009 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.76□□□□□ -0.21
SPCS3P61009 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.76□□□□□ -0.21
SPCS3P61009 AK4P3-201ENST00000418260 669 ntBASIC13.76□□□□□ -0.21
SPCS3P61009 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.76□□□□□ -0.21
SPCS3P61009 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.76□□□□□ -0.21
SPCS3P61009 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.76□□□□□ -0.21
SPCS3P61009 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.76□□□□□ -0.21
SPCS3P61009 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SPCS3P61009 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.76□□□□□ -0.21
SPCS3P61009 AC005336.2-201ENST00000593183 939 ntBASIC13.76□□□□□ -0.21
SPCS3P61009 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SPCS3P61009 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.76□□□□□ -0.21
SPCS3P61009 AC133561.5-201ENST00000635547 218 ntBASIC13.76□□□□□ -0.21
SPCS3P61009 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.76□□□□□ -0.21
SPCS3P61009 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPCS3P61009 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.76□□□□□ -0.21
SPCS3P61009 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPCS3P61009 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPCS3P61009 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SPCS3P61009 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPCS3P61009 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPCS3P61009 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPCS3P61009 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
SPCS3P61009 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPCS3P61009 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SPCS3P61009 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SPCS3P61009 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SPCS3P61009 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SPCS3P61009 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.76□□□□□ -0.21
SPCS3P61009 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms