Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB38P57729 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
RAB38P57729 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.81■□□□□ 0.12
RAB38P57729 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB38P57729 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB38P57729 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB38P57729 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB38P57729 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB38P57729 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.81■□□□□ 0.12
RAB38P57729 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RAB38P57729 AC068137.2-201ENST00000605408 478 ntBASIC15.81■□□□□ 0.12
RAB38P57729 AL603756.1-201ENST00000606511 2163 ntBASIC15.81■□□□□ 0.12
RAB38P57729 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RAB38P57729 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB38P57729 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB38P57729 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB38P57729 RNF216P1-203ENST00000404404 2427 ntBASIC15.8■□□□□ 0.12
RAB38P57729 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB38P57729 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB38P57729 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB38P57729 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.8■□□□□ 0.12
RAB38P57729 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB38P57729 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB38P57729 SNX33P1-201ENST00000592116 1762 ntBASIC15.8■□□□□ 0.12
RAB38P57729 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB38P57729 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB38P57729 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB38P57729 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB38P57729 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB38P57729 KRT8P39-201ENST00000396270 1433 ntBASIC15.8■□□□□ 0.12
RAB38P57729 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB38P57729 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB38P57729 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB38P57729 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB38P57729 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB38P57729 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB38P57729 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.8■□□□□ 0.12
RAB38P57729 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB38P57729 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
RAB38P57729 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.8■□□□□ 0.12
RAB38P57729 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.8■□□□□ 0.12
RAB38P57729 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.8■□□□□ 0.12
RAB38P57729 AL031055.1-201ENST00000606362 631 ntBASIC15.8■□□□□ 0.12
RAB38P57729 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB38P57729 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RAB38P57729 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB38P57729 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB38P57729 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB38P57729 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RAB38P57729 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB38P57729 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.8■□□□□ 0.12
RAB38P57729 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB38P57729 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB38P57729 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB38P57729 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB38P57729 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB38P57729 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB38P57729 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RAB38P57729 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RAB38P57729 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB38P57729 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB38P57729 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB38P57729 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
RAB38P57729 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RAB38P57729 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 RNU1-129P-201ENST00000384064 167 ntBASIC15.79■□□□□ 0.12
RAB38P57729 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB38P57729 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB38P57729 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB38P57729 MIR3909-201ENST00000579518 119 ntBASIC15.79■□□□□ 0.12
RAB38P57729 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB38P57729 U1.21-201ENST00000580816 167 ntBASIC15.79■□□□□ 0.12
RAB38P57729 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB38P57729 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RAB38P57729 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB38P57729 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB38P57729 AC006538.1-201ENST00000567905 1585 ntBASIC15.79■□□□□ 0.12
RAB38P57729 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB38P57729 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms