Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.75■□□□□ 0.11
CDH12P55289 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH12P55289 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH12P55289 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CDH12P55289 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CDH12P55289 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CDH12P55289 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH12P55289 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.75■□□□□ 0.11
CDH12P55289 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.75■□□□□ 0.11
CDH12P55289 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH12P55289 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH12P55289 AP000867.3-201ENST00000524675 377 ntBASIC15.75■□□□□ 0.11
CDH12P55289 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.75■□□□□ 0.11
CDH12P55289 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH12P55289 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH12P55289 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.75■□□□□ 0.11
CDH12P55289 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.75■□□□□ 0.11
CDH12P55289 NPAP1P7-201ENST00000613027 823 ntBASIC15.75■□□□□ 0.11
CDH12P55289 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.75■□□□□ 0.11
CDH12P55289 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH12P55289 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH12P55289 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH12P55289 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CDH12P55289 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH12P55289 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CDH12P55289 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CDH12P55289 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH12P55289 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CDH12P55289 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH12P55289 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH12P55289 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH12P55289 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CDH12P55289 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH12P55289 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH12P55289 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH12P55289 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH12P55289 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH12P55289 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
CDH12P55289 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH12P55289 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH12P55289 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH12P55289 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH12P55289 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDH12P55289 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH12P55289 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH12P55289 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CDH12P55289 PKD1P5-201ENST00000532415 10291 ntBASIC15.74■□□□□ 0.11
CDH12P55289 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH12P55289 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH12P55289 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH12P55289 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
CDH12P55289 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH12P55289 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH12P55289 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH12P55289 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH12P55289 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CDH12P55289 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDH12P55289 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH12P55289 AC104819.1-201ENST00000504587 486 ntBASIC15.74■□□□□ 0.11
CDH12P55289 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH12P55289 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH12P55289 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
CDH12P55289 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.74■□□□□ 0.11
CDH12P55289 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDH12P55289 AC069148.1-201ENST00000608741 768 ntBASIC15.74■□□□□ 0.11
CDH12P55289 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH12P55289 AC114341.1-201ENST00000618070 349 ntBASIC15.74■□□□□ 0.11
CDH12P55289 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH12P55289 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH12P55289 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CDH12P55289 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
CDH12P55289 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH12P55289 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CDH12P55289 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH12P55289 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH12P55289 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH12P55289 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH12P55289 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH12P55289 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH12P55289 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH12P55289 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH12P55289 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH12P55289 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
CDH12P55289 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH12P55289 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH12P55289 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH12P55289 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH12P55289 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CDH12P55289 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CDH12P55289 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
CDH12P55289 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH12P55289 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms