Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.72■□□□□ 0.11
PSMD4P55036 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PSMD4P55036 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.72■□□□□ 0.11
PSMD4P55036 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.72■□□□□ 0.11
PSMD4P55036 HNRNPDP1-201ENST00000439535 754 ntBASIC15.72■□□□□ 0.11
PSMD4P55036 PAWRP1-201ENST00000451083 565 ntBASIC15.72■□□□□ 0.11
PSMD4P55036 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
PSMD4P55036 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.72■□□□□ 0.11
PSMD4P55036 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PSMD4P55036 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.72■□□□□ 0.11
PSMD4P55036 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
PSMD4P55036 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PSMD4P55036 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PSMD4P55036 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PSMD4P55036 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.72■□□□□ 0.11
PSMD4P55036 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PSMD4P55036 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PSMD4P55036 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PSMD4P55036 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PSMD4P55036 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PSMD4P55036 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.72■□□□□ 0.11
PSMD4P55036 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PSMD4P55036 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PSMD4P55036 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PSMD4P55036 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PSMD4P55036 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PSMD4P55036 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.71■□□□□ 0.11
PSMD4P55036 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PSMD4P55036 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PSMD4P55036 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.71■□□□□ 0.11
PSMD4P55036 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PSMD4P55036 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.71■□□□□ 0.11
PSMD4P55036 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.71■□□□□ 0.11
PSMD4P55036 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PSMD4P55036 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PSMD4P55036 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
PSMD4P55036 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.71■□□□□ 0.11
PSMD4P55036 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PSMD4P55036 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
PSMD4P55036 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.71■□□□□ 0.11
PSMD4P55036 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.71■□□□□ 0.11
PSMD4P55036 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
PSMD4P55036 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.71■□□□□ 0.11
PSMD4P55036 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.71■□□□□ 0.11
PSMD4P55036 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.71■□□□□ 0.11
PSMD4P55036 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.71■□□□□ 0.11
PSMD4P55036 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.71■□□□□ 0.11
PSMD4P55036 AC008667.4-201ENST00000607370 168 ntBASIC15.71■□□□□ 0.11
PSMD4P55036 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
PSMD4P55036 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PSMD4P55036 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PSMD4P55036 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PSMD4P55036 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PSMD4P55036 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PSMD4P55036 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PSMD4P55036 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PSMD4P55036 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PSMD4P55036 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PSMD4P55036 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
PSMD4P55036 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
PSMD4P55036 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PSMD4P55036 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PSMD4P55036 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.7■□□□□ 0.1
PSMD4P55036 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PSMD4P55036 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PSMD4P55036 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PSMD4P55036 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PSMD4P55036 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PSMD4P55036 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PSMD4P55036 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PSMD4P55036 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PSMD4P55036 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
PSMD4P55036 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PSMD4P55036 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
PSMD4P55036 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PSMD4P55036 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PSMD4P55036 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.7■□□□□ 0.1
PSMD4P55036 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.7■□□□□ 0.1
PSMD4P55036 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.7■□□□□ 0.1
PSMD4P55036 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.7■□□□□ 0.1
PSMD4P55036 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.7■□□□□ 0.1
PSMD4P55036 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.7■□□□□ 0.1
PSMD4P55036 AC148477.8-201ENST00000624298 468 ntBASIC15.7■□□□□ 0.1
PSMD4P55036 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PSMD4P55036 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.7■□□□□ 0.1
PSMD4P55036 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PSMD4P55036 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PSMD4P55036 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PSMD4P55036 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PSMD4P55036 NKILA-202ENST00000614771 2598 ntBASIC15.7■□□□□ 0.1
PSMD4P55036 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PSMD4P55036 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.7■□□□□ 0.1
PSMD4P55036 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.7■□□□□ 0.1
PSMD4P55036 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PSMD4P55036 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PSMD4P55036 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
PSMD4P55036 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PSMD4P55036 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms