Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CSNK1EP49674 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1EP49674 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.42■□□□□ 0.22
CSNK1EP49674 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1EP49674 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1EP49674 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1EP49674 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.42■□□□□ 0.22
CSNK1EP49674 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1EP49674 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1EP49674 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CSNK1EP49674 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1EP49674 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1EP49674 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1EP49674 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1EP49674 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CSNK1EP49674 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1EP49674 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.41■□□□□ 0.22
CSNK1EP49674 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1EP49674 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1EP49674 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.41■□□□□ 0.22
CSNK1EP49674 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.41■□□□□ 0.22
CSNK1EP49674 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1EP49674 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CSNK1EP49674 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1EP49674 PIN1P1-201ENST00000412108 996 ntBASIC16.41■□□□□ 0.22
CSNK1EP49674 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.41■□□□□ 0.22
CSNK1EP49674 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1EP49674 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.41■□□□□ 0.22
CSNK1EP49674 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.41■□□□□ 0.22
CSNK1EP49674 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.41■□□□□ 0.22
CSNK1EP49674 AC073389.1-201ENST00000595595 795 ntBASIC16.41■□□□□ 0.22
CSNK1EP49674 AC009118.2-201ENST00000613275 655 ntBASIC16.41■□□□□ 0.22
CSNK1EP49674 AL662799.1-202ENST00000614205 422 ntBASIC16.41■□□□□ 0.22
CSNK1EP49674 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1EP49674 AC022144.1-201ENST00000602255 1580 ntBASIC16.41■□□□□ 0.22
CSNK1EP49674 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.41■□□□□ 0.22
CSNK1EP49674 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.41■□□□□ 0.22
CSNK1EP49674 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.41■□□□□ 0.22
CSNK1EP49674 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1EP49674 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1EP49674 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1EP49674 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CSNK1EP49674 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1EP49674 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1EP49674 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1EP49674 OR6D1P-202ENST00000641007 5290 ntBASIC16.4■□□□□ 0.22
CSNK1EP49674 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1EP49674 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1EP49674 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.4■□□□□ 0.22
CSNK1EP49674 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1EP49674 AC116353.5-201ENST00000638148 1699 ntBASIC16.4■□□□□ 0.22
CSNK1EP49674 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CSNK1EP49674 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1EP49674 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1EP49674 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.4■□□□□ 0.22
CSNK1EP49674 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1EP49674 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1EP49674 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.4■□□□□ 0.22
CSNK1EP49674 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1EP49674 AL390961.4-201ENST00000623958 2535 ntBASIC16.4■□□□□ 0.22
CSNK1EP49674 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CSNK1EP49674 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1EP49674 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.4■□□□□ 0.22
CSNK1EP49674 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.4■□□□□ 0.22
CSNK1EP49674 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.4■□□□□ 0.22
CSNK1EP49674 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CSNK1EP49674 AC004233.3-201ENST00000607794 1269 ntBASIC16.4■□□□□ 0.22
CSNK1EP49674 AC007967.4-201ENST00000614700 386 ntBASIC16.4■□□□□ 0.22
CSNK1EP49674 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CSNK1EP49674 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.4■□□□□ 0.22
CSNK1EP49674 AC025048.6-201ENST00000634326 1161 ntBASIC16.4■□□□□ 0.22
CSNK1EP49674 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CSNK1EP49674 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1EP49674 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1EP49674 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.4■□□□□ 0.22
CSNK1EP49674 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1EP49674 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.4■□□□□ 0.22
CSNK1EP49674 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1EP49674 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.4■□□□□ 0.22
CSNK1EP49674 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.4■□□□□ 0.22
CSNK1EP49674 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CSNK1EP49674 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.4■□□□□ 0.22
CSNK1EP49674 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.4■□□□□ 0.22
CSNK1EP49674 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1EP49674 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CSNK1EP49674 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.22
CSNK1EP49674 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
CSNK1EP49674 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.39■□□□□ 0.21
CSNK1EP49674 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.39■□□□□ 0.21
CSNK1EP49674 AC008764.6-201ENST00000595909 2069 ntBASIC16.39■□□□□ 0.21
CSNK1EP49674 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.39■□□□□ 0.21
CSNK1EP49674 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1EP49674 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.39■□□□□ 0.21
CSNK1EP49674 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.39■□□□□ 0.21
CSNK1EP49674 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1EP49674 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1EP49674 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.39■□□□□ 0.21
CSNK1EP49674 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1EP49674 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1EP49674 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms