Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 AC134043.2-201ENST00000624206 2238 ntBASIC20.31■□□□□ 0.84
HOXA10P31260 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.31■□□□□ 0.84
HOXA10P31260 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA10P31260 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA10P31260 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.31■□□□□ 0.84
HOXA10P31260 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA10P31260 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.31■□□□□ 0.84
HOXA10P31260 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HOXA10P31260 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
HOXA10P31260 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.31■□□□□ 0.84
HOXA10P31260 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA10P31260 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA10P31260 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.31■□□□□ 0.84
HOXA10P31260 RN7SL752P-201ENST00000463779 287 ntBASIC20.31■□□□□ 0.84
HOXA10P31260 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.31■□□□□ 0.84
HOXA10P31260 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA10P31260 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.31■□□□□ 0.84
HOXA10P31260 AC106886.1-201ENST00000568660 600 ntBASIC20.31■□□□□ 0.84
HOXA10P31260 AC132938.2-201ENST00000579188 680 ntBASIC20.31■□□□□ 0.84
HOXA10P31260 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA10P31260 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.31■□□□□ 0.84
HOXA10P31260 AL591163.1-201ENST00000641757 987 ntBASIC20.31■□□□□ 0.84
HOXA10P31260 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA10P31260 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
HOXA10P31260 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA10P31260 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA10P31260 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA10P31260 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA10P31260 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.31■□□□□ 0.84
HOXA10P31260 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA10P31260 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA10P31260 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
HOXA10P31260 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA10P31260 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
HOXA10P31260 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.3■□□□□ 0.84
HOXA10P31260 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA10P31260 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.3■□□□□ 0.84
HOXA10P31260 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA10P31260 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.3■□□□□ 0.84
HOXA10P31260 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.3■□□□□ 0.84
HOXA10P31260 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA10P31260 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA10P31260 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA10P31260 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA10P31260 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA10P31260 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA10P31260 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA10P31260 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.3■□□□□ 0.84
HOXA10P31260 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.3■□□□□ 0.84
HOXA10P31260 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.3■□□□□ 0.84
HOXA10P31260 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
HOXA10P31260 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA10P31260 WASH4P-201ENST00000564273 1246 ntBASIC20.3■□□□□ 0.84
HOXA10P31260 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.3■□□□□ 0.84
HOXA10P31260 AC024267.1-201ENST00000582320 895 ntBASIC20.3■□□□□ 0.84
HOXA10P31260 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
HOXA10P31260 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.3■□□□□ 0.84
HOXA10P31260 AL033527.5-202ENST00000641632 1098 ntBASIC20.3■□□□□ 0.84
HOXA10P31260 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA10P31260 AL589702.1-201ENST00000641229 1509 ntBASIC20.3■□□□□ 0.84
HOXA10P31260 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA10P31260 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA10P31260 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
HOXA10P31260 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.3■□□□□ 0.84
HOXA10P31260 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HOXA10P31260 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
HOXA10P31260 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HOXA10P31260 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA10P31260 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.3■□□□□ 0.84
HOXA10P31260 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA10P31260 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA10P31260 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.29■□□□□ 0.84
HOXA10P31260 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA10P31260 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA10P31260 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA10P31260 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA10P31260 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HOXA10P31260 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.29■□□□□ 0.84
HOXA10P31260 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA10P31260 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA10P31260 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA10P31260 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.29■□□□□ 0.84
HOXA10P31260 SERBP1P3-201ENST00000459980 809 ntBASIC20.29■□□□□ 0.84
HOXA10P31260 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.29■□□□□ 0.84
HOXA10P31260 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC20.29■□□□□ 0.84
HOXA10P31260 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.29■□□□□ 0.84
HOXA10P31260 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.29■□□□□ 0.84
HOXA10P31260 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.29■□□□□ 0.84
HOXA10P31260 SRD5A3P1-201ENST00000603021 949 ntBASIC20.29■□□□□ 0.84
HOXA10P31260 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.29■□□□□ 0.84
HOXA10P31260 CROCCP2-202ENST00000412962 2773 ntBASIC20.29■□□□□ 0.84
HOXA10P31260 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA10P31260 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA10P31260 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.29■□□□□ 0.84
HOXA10P31260 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA10P31260 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA10P31260 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA10P31260 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA10P31260 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA10P31260 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms