Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.27■□□□□ 0.52
CCDC172P0C7W6 AL353135.1-201ENST00000606729 504 ntBASIC18.27■□□□□ 0.52
CCDC172P0C7W6 AL139288.1-201ENST00000623748 933 ntBASIC18.27■□□□□ 0.52
CCDC172P0C7W6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC172P0C7W6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
CCDC172P0C7W6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC172P0C7W6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC172P0C7W6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
CCDC172P0C7W6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.27■□□□□ 0.51
CCDC172P0C7W6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC172P0C7W6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
CCDC172P0C7W6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC172P0C7W6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC172P0C7W6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC172P0C7W6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.26■□□□□ 0.51
CCDC172P0C7W6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 AC093458.2-201ENST00000623150 629 ntBASIC18.26■□□□□ 0.51
CCDC172P0C7W6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 AL391256.1-201ENST00000443260 1855 ntBASIC18.26■□□□□ 0.51
CCDC172P0C7W6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC172P0C7W6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC172P0C7W6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC172P0C7W6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
CCDC172P0C7W6 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC172P0C7W6 KRT8P49-201ENST00000604166 1432 ntBASIC18.25■□□□□ 0.51
CCDC172P0C7W6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC172P0C7W6 AL645728.1-201ENST00000366221 2101 ntBASIC18.25■□□□□ 0.51
CCDC172P0C7W6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC172P0C7W6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC172P0C7W6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC172P0C7W6 LINC00895-201ENST00000629028 1637 ntBASIC18.25■□□□□ 0.51
CCDC172P0C7W6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC172P0C7W6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC172P0C7W6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC172P0C7W6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC172P0C7W6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC172P0C7W6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CCDC172P0C7W6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC172P0C7W6 AP001269.4-201ENST00000609611 512 ntBASIC18.25■□□□□ 0.51
CCDC172P0C7W6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC172P0C7W6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC172P0C7W6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC172P0C7W6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC172P0C7W6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms