Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.51■□□□□ 0.07
THBS1P07996 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.51■□□□□ 0.07
THBS1P07996 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.51■□□□□ 0.07
THBS1P07996 AC073648.2-201ENST00000510116 352 ntBASIC15.51■□□□□ 0.07
THBS1P07996 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.51■□□□□ 0.07
THBS1P07996 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.51■□□□□ 0.07
THBS1P07996 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.51■□□□□ 0.07
THBS1P07996 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.51■□□□□ 0.07
THBS1P07996 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.51■□□□□ 0.07
THBS1P07996 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
THBS1P07996 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
THBS1P07996 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
THBS1P07996 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.51■□□□□ 0.07
THBS1P07996 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
THBS1P07996 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.5■□□□□ 0.07
THBS1P07996 AC011270.2-201ENST00000624293 2550 ntBASIC15.5■□□□□ 0.07
THBS1P07996 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
THBS1P07996 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
THBS1P07996 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
THBS1P07996 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
THBS1P07996 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
THBS1P07996 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
THBS1P07996 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
THBS1P07996 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
THBS1P07996 TNRC18P3-201ENST00000441896 2691 ntBASIC15.5■□□□□ 0.07
THBS1P07996 ME2P1-201ENST00000426028 1970 ntBASIC15.5■□□□□ 0.07
THBS1P07996 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
THBS1P07996 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
THBS1P07996 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
THBS1P07996 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.5■□□□□ 0.07
THBS1P07996 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.5■□□□□ 0.07
THBS1P07996 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.5■□□□□ 0.07
THBS1P07996 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.5■□□□□ 0.07
THBS1P07996 RPS15P9-201ENST00000494093 319 ntBASIC15.5■□□□□ 0.07
THBS1P07996 SLC25A6P2-201ENST00000497974 877 ntBASIC15.5■□□□□ 0.07
THBS1P07996 OR7E14P-202ENST00000530490 1290 ntBASIC15.5■□□□□ 0.07
THBS1P07996 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.5■□□□□ 0.07
THBS1P07996 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.5■□□□□ 0.07
THBS1P07996 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.5■□□□□ 0.07
THBS1P07996 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.5■□□□□ 0.07
THBS1P07996 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
THBS1P07996 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
THBS1P07996 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
THBS1P07996 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
THBS1P07996 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
THBS1P07996 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
THBS1P07996 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
THBS1P07996 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
THBS1P07996 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
THBS1P07996 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
THBS1P07996 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THBS1P07996 SNX33P1-201ENST00000592116 1762 ntBASIC15.49■□□□□ 0.07
THBS1P07996 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
THBS1P07996 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THBS1P07996 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
THBS1P07996 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THBS1P07996 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
THBS1P07996 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THBS1P07996 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THBS1P07996 AC131009.4-201ENST00000624048 1740 ntBASIC15.49■□□□□ 0.07
THBS1P07996 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
THBS1P07996 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
THBS1P07996 DOC2GP-204ENST00000639052 2548 ntBASIC15.49■□□□□ 0.07
THBS1P07996 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
THBS1P07996 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
THBS1P07996 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
THBS1P07996 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.49■□□□□ 0.07
THBS1P07996 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THBS1P07996 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
THBS1P07996 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
THBS1P07996 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.49■□□□□ 0.07
THBS1P07996 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THBS1P07996 MRPL3P1-201ENST00000400109 1033 ntBASIC15.49■□□□□ 0.07
THBS1P07996 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.49■□□□□ 0.07
THBS1P07996 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.49■□□□□ 0.07
THBS1P07996 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.49■□□□□ 0.07
THBS1P07996 AC136632.2-201ENST00000512891 861 ntBASIC15.49■□□□□ 0.07
THBS1P07996 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.49■□□□□ 0.07
THBS1P07996 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
THBS1P07996 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THBS1P07996 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
THBS1P07996 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.49■□□□□ 0.07
THBS1P07996 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.49■□□□□ 0.07
THBS1P07996 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
THBS1P07996 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.49■□□□□ 0.07
THBS1P07996 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
THBS1P07996 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
THBS1P07996 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms