Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SFTPBP07988 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
SFTPBP07988 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SFTPBP07988 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.72□□□□□ -0.05
SFTPBP07988 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.72□□□□□ -0.05
SFTPBP07988 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SFTPBP07988 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SFTPBP07988 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SFTPBP07988 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SFTPBP07988 AC092068.3-201ENST00000587894 2016 ntBASIC14.71□□□□□ -0.05
SFTPBP07988 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
SFTPBP07988 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SFTPBP07988 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.71□□□□□ -0.05
SFTPBP07988 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.71□□□□□ -0.05
SFTPBP07988 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SFTPBP07988 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.71□□□□□ -0.05
SFTPBP07988 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SFTPBP07988 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SFTPBP07988 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.71□□□□□ -0.05
SFTPBP07988 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SFTPBP07988 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SFTPBP07988 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.71□□□□□ -0.05
SFTPBP07988 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.71□□□□□ -0.05
SFTPBP07988 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
SFTPBP07988 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SFTPBP07988 AC026396.1-201ENST00000419388 421 ntBASIC14.71□□□□□ -0.05
SFTPBP07988 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.71□□□□□ -0.05
SFTPBP07988 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SFTPBP07988 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.71□□□□□ -0.05
SFTPBP07988 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.71□□□□□ -0.05
SFTPBP07988 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SFTPBP07988 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.71□□□□□ -0.05
SFTPBP07988 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.71□□□□□ -0.05
SFTPBP07988 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
SFTPBP07988 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SFTPBP07988 AC011467.2-201ENST00000598425 242 ntBASIC14.71□□□□□ -0.05
SFTPBP07988 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SFTPBP07988 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SFTPBP07988 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.71□□□□□ -0.05
SFTPBP07988 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SFTPBP07988 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.71□□□□□ -0.05
SFTPBP07988 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
SFTPBP07988 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SFTPBP07988 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.71□□□□□ -0.05
SFTPBP07988 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SFTPBP07988 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.71□□□□□ -0.05
SFTPBP07988 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.71□□□□□ -0.05
SFTPBP07988 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
SFTPBP07988 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
SFTPBP07988 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SFTPBP07988 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SFTPBP07988 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.71□□□□□ -0.06
SFTPBP07988 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.71□□□□□ -0.06
SFTPBP07988 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SFTPBP07988 AL135999.2-201ENST00000622438 1686 ntBASIC14.71□□□□□ -0.06
SFTPBP07988 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SFTPBP07988 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
SFTPBP07988 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SFTPBP07988 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.71□□□□□ -0.06
SFTPBP07988 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
SFTPBP07988 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SFTPBP07988 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.06
SFTPBP07988 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SFTPBP07988 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
SFTPBP07988 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SFTPBP07988 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SFTPBP07988 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.7□□□□□ -0.06
SFTPBP07988 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SFTPBP07988 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SFTPBP07988 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SFTPBP07988 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SFTPBP07988 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SFTPBP07988 AC009336.1-201ENST00000608941 1553 ntBASIC14.7□□□□□ -0.06
SFTPBP07988 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SFTPBP07988 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SFTPBP07988 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SFTPBP07988 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SFTPBP07988 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SFTPBP07988 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.7□□□□□ -0.06
SFTPBP07988 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SFTPBP07988 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
SFTPBP07988 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms