Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
RETP07949 COX5BP8-201ENST00000416911 349 ntBASIC16.98■□□□□ 0.31
RETP07949 SPCS2P4-201ENST00000436160 681 ntBASIC16.98■□□□□ 0.31
RETP07949 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.98■□□□□ 0.31
RETP07949 ATP5G2P4-201ENST00000442175 420 ntBASIC16.98■□□□□ 0.31
RETP07949 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.98■□□□□ 0.31
RETP07949 RN7SL692P-201ENST00000464677 288 ntBASIC16.98■□□□□ 0.31
RETP07949 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.98■□□□□ 0.31
RETP07949 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.98■□□□□ 0.31
RETP07949 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RETP07949 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.98■□□□□ 0.31
RETP07949 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.98■□□□□ 0.31
RETP07949 AL161645.1-201ENST00000622716 1255 ntBASIC16.98■□□□□ 0.31
RETP07949 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.98■□□□□ 0.31
RETP07949 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.98■□□□□ 0.31
RETP07949 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
RETP07949 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RETP07949 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RETP07949 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RETP07949 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RETP07949 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RETP07949 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RETP07949 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RETP07949 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RETP07949 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.97■□□□□ 0.31
RETP07949 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.97■□□□□ 0.31
RETP07949 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
RETP07949 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RETP07949 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.97■□□□□ 0.31
RETP07949 AL355312.1-201ENST00000407115 2176 ntBASIC16.97■□□□□ 0.31
RETP07949 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.97■□□□□ 0.31
RETP07949 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RETP07949 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RETP07949 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.97■□□□□ 0.31
RETP07949 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.97■□□□□ 0.31
RETP07949 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.97■□□□□ 0.31
RETP07949 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RETP07949 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.97■□□□□ 0.31
RETP07949 AC002558.1-201ENST00000488906 803 ntBASIC16.97■□□□□ 0.31
RETP07949 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.97■□□□□ 0.31
RETP07949 SERBP1P5-201ENST00000510079 1181 ntBASIC16.97■□□□□ 0.31
RETP07949 AC009118.2-201ENST00000613275 655 ntBASIC16.97■□□□□ 0.31
RETP07949 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RETP07949 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RETP07949 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.97■□□□□ 0.31
RETP07949 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RETP07949 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RETP07949 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RETP07949 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RETP07949 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.97■□□□□ 0.31
RETP07949 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RETP07949 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RETP07949 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.97■□□□□ 0.31
RETP07949 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RETP07949 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RETP07949 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RETP07949 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RETP07949 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.96■□□□□ 0.31
RETP07949 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RETP07949 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RETP07949 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.96■□□□□ 0.31
RETP07949 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RETP07949 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.96■□□□□ 0.31
RETP07949 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.96■□□□□ 0.31
RETP07949 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RETP07949 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RETP07949 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RETP07949 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.96■□□□□ 0.31
RETP07949 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RETP07949 SPDYE14P-201ENST00000442619 822 ntBASIC16.96■□□□□ 0.31
RETP07949 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.96■□□□□ 0.31
RETP07949 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.96■□□□□ 0.31
RETP07949 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.96■□□□□ 0.31
RETP07949 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.96■□□□□ 0.31
RETP07949 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RETP07949 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.96■□□□□ 0.31
RETP07949 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.96■□□□□ 0.31
RETP07949 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.96■□□□□ 0.31
RETP07949 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RETP07949 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RETP07949 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RETP07949 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RETP07949 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RETP07949 AC133963.1-201ENST00000504166 1679 ntBASIC16.96■□□□□ 0.31
RETP07949 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RETP07949 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RETP07949 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RETP07949 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms