Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOA4P06727 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOA4P06727 HLA-A-202ENST00000376806 1854 ntBASIC16.92■□□□□ 0.3
APOA4P06727 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
APOA4P06727 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOA4P06727 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.92■□□□□ 0.3
APOA4P06727 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOA4P06727 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.92■□□□□ 0.3
APOA4P06727 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
APOA4P06727 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOA4P06727 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.92■□□□□ 0.3
APOA4P06727 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOA4P06727 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOA4P06727 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOA4P06727 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOA4P06727 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.91■□□□□ 0.3
APOA4P06727 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APOA4P06727 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.91■□□□□ 0.3
APOA4P06727 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
APOA4P06727 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.91■□□□□ 0.3
APOA4P06727 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
APOA4P06727 PCDHB17P-201ENST00000539533 2393 ntBASIC16.91■□□□□ 0.3
APOA4P06727 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.91■□□□□ 0.3
APOA4P06727 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.91■□□□□ 0.3
APOA4P06727 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.91■□□□□ 0.3
APOA4P06727 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.91■□□□□ 0.3
APOA4P06727 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.91■□□□□ 0.3
APOA4P06727 LAGE3P1-201ENST00000425356 484 ntBASIC16.91■□□□□ 0.3
APOA4P06727 FAM197Y8-203ENST00000450145 560 ntBASIC16.91■□□□□ 0.3
APOA4P06727 RNPS1P1-201ENST00000507437 918 ntBASIC16.91■□□□□ 0.3
APOA4P06727 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APOA4P06727 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.91■□□□□ 0.3
APOA4P06727 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.91■□□□□ 0.3
APOA4P06727 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.91■□□□□ 0.3
APOA4P06727 AC025062.2-201ENST00000605477 670 ntBASIC16.91■□□□□ 0.3
APOA4P06727 AL353135.1-201ENST00000606729 504 ntBASIC16.91■□□□□ 0.3
APOA4P06727 AL139424.1-201ENST00000607572 797 ntBASIC16.91■□□□□ 0.3
APOA4P06727 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APOA4P06727 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOA4P06727 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOA4P06727 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOA4P06727 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOA4P06727 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
APOA4P06727 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.91■□□□□ 0.3
APOA4P06727 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOA4P06727 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APOA4P06727 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APOA4P06727 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APOA4P06727 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.91■□□□□ 0.3
APOA4P06727 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.91■□□□□ 0.3
APOA4P06727 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APOA4P06727 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA4P06727 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.9■□□□□ 0.3
APOA4P06727 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
APOA4P06727 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA4P06727 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA4P06727 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA4P06727 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA4P06727 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA4P06727 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APOA4P06727 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.9■□□□□ 0.3
APOA4P06727 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.9■□□□□ 0.3
APOA4P06727 AC079781.3-201ENST00000449110 356 ntBASIC16.9■□□□□ 0.3
APOA4P06727 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA4P06727 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.9■□□□□ 0.3
APOA4P06727 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA4P06727 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.9■□□□□ 0.3
APOA4P06727 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.9■□□□□ 0.3
APOA4P06727 OR7E14P-202ENST00000530490 1290 ntBASIC16.9■□□□□ 0.3
APOA4P06727 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
APOA4P06727 TP73-AS1-207ENST00000624167 988 ntBASIC16.9■□□□□ 0.3
APOA4P06727 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
APOA4P06727 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
APOA4P06727 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA4P06727 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
APOA4P06727 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.9■□□□□ 0.3
APOA4P06727 AL513523.2-202ENST00000427283 2040 ntBASIC16.9■□□□□ 0.3
APOA4P06727 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
APOA4P06727 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APOA4P06727 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA4P06727 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APOA4P06727 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.89■□□□□ 0.3
APOA4P06727 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
APOA4P06727 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
APOA4P06727 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
APOA4P06727 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.89■□□□□ 0.29
APOA4P06727 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.89■□□□□ 0.29
APOA4P06727 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.29
APOA4P06727 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
APOA4P06727 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOA4P06727 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOA4P06727 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
APOA4P06727 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.89■□□□□ 0.29
APOA4P06727 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
APOA4P06727 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
APOA4P06727 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOA4P06727 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
APOA4P06727 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOA4P06727 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOA4P06727 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms