Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.81■■□□□ 1.08
COL5A2P05997 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
COL5A2P05997 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
COL5A2P05997 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
COL5A2P05997 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL5A2P05997 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL5A2P05997 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL5A2P05997 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL5A2P05997 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL5A2P05997 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
COL5A2P05997 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL5A2P05997 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL5A2P05997 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL5A2P05997 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL5A2P05997 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC21.8■■□□□ 1.08
COL5A2P05997 BNIP3P42-201ENST00000454982 569 ntBASIC21.8■■□□□ 1.08
COL5A2P05997 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC21.8■■□□□ 1.08
COL5A2P05997 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC21.8■■□□□ 1.08
COL5A2P05997 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC21.8■■□□□ 1.08
COL5A2P05997 RRP7BP-205ENST00000566851 833 ntBASIC21.8■■□□□ 1.08
COL5A2P05997 AC024267.1-201ENST00000582320 895 ntBASIC21.8■■□□□ 1.08
COL5A2P05997 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC21.8■■□□□ 1.08
COL5A2P05997 BNIP3P29-201ENST00000598302 571 ntBASIC21.8■■□□□ 1.08
COL5A2P05997 AC011447.5-201ENST00000616168 564 ntBASIC21.8■■□□□ 1.08
COL5A2P05997 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC21.8■■□□□ 1.08
COL5A2P05997 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL5A2P05997 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL5A2P05997 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
COL5A2P05997 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
COL5A2P05997 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.8■■□□□ 1.08
COL5A2P05997 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL5A2P05997 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.8■■□□□ 1.08
COL5A2P05997 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC21.79■■□□□ 1.08
COL5A2P05997 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL5A2P05997 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL5A2P05997 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC21.79■■□□□ 1.08
COL5A2P05997 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL5A2P05997 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
COL5A2P05997 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.79■■□□□ 1.08
COL5A2P05997 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL5A2P05997 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
COL5A2P05997 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC21.79■■□□□ 1.08
COL5A2P05997 RPL28-204ENST00000431533 590 ntTSL 2 BASIC21.79■■□□□ 1.08
COL5A2P05997 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL5A2P05997 CROCCP4-201ENST00000457096 498 ntBASIC21.79■■□□□ 1.08
COL5A2P05997 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC21.79■■□□□ 1.08
COL5A2P05997 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL5A2P05997 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC21.79■■□□□ 1.08
COL5A2P05997 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC21.79■■□□□ 1.08
COL5A2P05997 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL5A2P05997 RPL28-206ENST00000558752 671 ntTSL 3 BASIC21.79■■□□□ 1.08
COL5A2P05997 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL5A2P05997 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
COL5A2P05997 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL5A2P05997 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL5A2P05997 AC135050.7-201ENST00000624508 2218 ntBASIC21.79■■□□□ 1.08
COL5A2P05997 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL5A2P05997 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL5A2P05997 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.79■■□□□ 1.08
COL5A2P05997 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL5A2P05997 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.79■■□□□ 1.08
COL5A2P05997 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL5A2P05997 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC21.79■■□□□ 1.08
COL5A2P05997 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL5A2P05997 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL5A2P05997 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL5A2P05997 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
COL5A2P05997 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL5A2P05997 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC21.78■■□□□ 1.08
COL5A2P05997 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL5A2P05997 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL5A2P05997 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
COL5A2P05997 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC21.78■■□□□ 1.08
COL5A2P05997 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC21.78■■□□□ 1.08
COL5A2P05997 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL5A2P05997 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC21.78■■□□□ 1.08
COL5A2P05997 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL5A2P05997 AC133552.6-201ENST00000613406 534 ntBASIC21.78■■□□□ 1.08
COL5A2P05997 WNT11-204ENST00000621122 789 ntTSL 5 BASIC21.78■■□□□ 1.08
COL5A2P05997 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC21.78■■□□□ 1.08
COL5A2P05997 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL5A2P05997 AL589702.1-201ENST00000641229 1509 ntBASIC21.78■■□□□ 1.08
COL5A2P05997 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL5A2P05997 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL5A2P05997 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL5A2P05997 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC21.78■■□□□ 1.08
COL5A2P05997 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
COL5A2P05997 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL5A2P05997 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC21.78■■□□□ 1.08
COL5A2P05997 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL5A2P05997 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL5A2P05997 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC21.77■■□□□ 1.08
COL5A2P05997 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC21.77■■□□□ 1.08
COL5A2P05997 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL5A2P05997 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC21.77■■□□□ 1.08
COL5A2P05997 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL5A2P05997 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
COL5A2P05997 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC21.77■■□□□ 1.08
COL5A2P05997 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC21.77■■□□□ 1.08
COL5A2P05997 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms