Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 SNX33P1-201ENST00000592116 1762 ntBASIC18.19■□□□□ 0.5
CHRNA1P02708 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.19■□□□□ 0.5
CHRNA1P02708 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CHRNA1P02708 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CHRNA1P02708 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA1P02708 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA1P02708 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA1P02708 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA1P02708 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA1P02708 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CHRNA1P02708 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CHRNA1P02708 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA1P02708 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.18■□□□□ 0.5
CHRNA1P02708 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA1P02708 HLA-H-201ENST00000383620 1096 ntBASIC18.18■□□□□ 0.5
CHRNA1P02708 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CHRNA1P02708 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.18■□□□□ 0.5
CHRNA1P02708 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.18■□□□□ 0.5
CHRNA1P02708 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.18■□□□□ 0.5
CHRNA1P02708 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA1P02708 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.18■□□□□ 0.5
CHRNA1P02708 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.18■□□□□ 0.5
CHRNA1P02708 AC012645.4-201ENST00000610691 1061 ntBASIC18.18■□□□□ 0.5
CHRNA1P02708 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.18■□□□□ 0.5
CHRNA1P02708 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA1P02708 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CHRNA1P02708 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.18■□□□□ 0.5
CHRNA1P02708 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA1P02708 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA1P02708 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
CHRNA1P02708 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.17■□□□□ 0.5
CHRNA1P02708 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.17■□□□□ 0.5
CHRNA1P02708 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.17■□□□□ 0.5
CHRNA1P02708 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.17■□□□□ 0.5
CHRNA1P02708 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.17■□□□□ 0.5
CHRNA1P02708 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.17■□□□□ 0.5
CHRNA1P02708 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.17■□□□□ 0.5
CHRNA1P02708 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.17■□□□□ 0.5
CHRNA1P02708 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
CHRNA1P02708 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.17■□□□□ 0.5
CHRNA1P02708 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 SPTSSB-204ENST00000617024 1292 ntBASIC18.17■□□□□ 0.5
CHRNA1P02708 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.17■□□□□ 0.5
CHRNA1P02708 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.17■□□□□ 0.5
CHRNA1P02708 AC063926.2-201ENST00000623766 1308 ntBASIC18.17■□□□□ 0.5
CHRNA1P02708 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA1P02708 AC005332.8-201ENST00000622750 2735 ntBASIC18.16■□□□□ 0.5
CHRNA1P02708 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA1P02708 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CHRNA1P02708 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CHRNA1P02708 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.16■□□□□ 0.5
CHRNA1P02708 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA1P02708 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA1P02708 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.16■□□□□ 0.5
CHRNA1P02708 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA1P02708 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA1P02708 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA1P02708 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CHRNA1P02708 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA1P02708 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CHRNA1P02708 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA1P02708 CRB3P1-201ENST00000449338 276 ntBASIC18.16■□□□□ 0.5
CHRNA1P02708 HLA-V-204ENST00000476601 1289 ntBASIC18.16■□□□□ 0.5
CHRNA1P02708 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA1P02708 AP005018.1-201ENST00000525475 301 ntBASIC18.16■□□□□ 0.5
CHRNA1P02708 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA1P02708 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA1P02708 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA1P02708 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
CHRNA1P02708 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHRNA1P02708 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA1P02708 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA1P02708 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA1P02708 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CHRNA1P02708 AC022144.1-201ENST00000602255 1580 ntBASIC18.16■□□□□ 0.5
CHRNA1P02708 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms