Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
APOC3P02656 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.54□□□□□ -0.24
APOC3P02656 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
APOC3P02656 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.54□□□□□ -0.24
APOC3P02656 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.54□□□□□ -0.24
APOC3P02656 DDX43P3-201ENST00000441064 443 ntBASIC13.54□□□□□ -0.24
APOC3P02656 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.54□□□□□ -0.24
APOC3P02656 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.54□□□□□ -0.24
APOC3P02656 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.54□□□□□ -0.24
APOC3P02656 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.54□□□□□ -0.24
APOC3P02656 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.54□□□□□ -0.24
APOC3P02656 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.54□□□□□ -0.24
APOC3P02656 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC3P02656 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
APOC3P02656 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC3P02656 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.53□□□□□ -0.24
APOC3P02656 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC3P02656 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.53□□□□□ -0.24
APOC3P02656 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC3P02656 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC3P02656 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC3P02656 AL731571.1-201ENST00000617058 5428 ntBASIC13.53□□□□□ -0.24
APOC3P02656 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC3P02656 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.53□□□□□ -0.24
APOC3P02656 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC3P02656 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
APOC3P02656 AC024257.2-201ENST00000549699 147 ntBASIC13.53□□□□□ -0.24
APOC3P02656 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.53□□□□□ -0.24
APOC3P02656 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.53□□□□□ -0.24
APOC3P02656 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.53□□□□□ -0.24
APOC3P02656 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.53□□□□□ -0.24
APOC3P02656 TERF1P2-201ENST00000583350 1212 ntBASIC13.53□□□□□ -0.24
APOC3P02656 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC13.53□□□□□ -0.24
APOC3P02656 AC136621.1-201ENST00000624017 2304 ntBASIC13.53□□□□□ -0.24
APOC3P02656 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC3P02656 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOC3P02656 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC3P02656 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
APOC3P02656 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOC3P02656 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC3P02656 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.53□□□□□ -0.24
APOC3P02656 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC3P02656 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
APOC3P02656 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.53□□□□□ -0.24
APOC3P02656 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC3P02656 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.53□□□□□ -0.24
APOC3P02656 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC3P02656 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC3P02656 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
APOC3P02656 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
APOC3P02656 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOC3P02656 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
APOC3P02656 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.52□□□□□ -0.24
APOC3P02656 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.52□□□□□ -0.24
APOC3P02656 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.52□□□□□ -0.24
APOC3P02656 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
APOC3P02656 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
APOC3P02656 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
APOC3P02656 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.52□□□□□ -0.24
APOC3P02656 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.52□□□□□ -0.24
APOC3P02656 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
APOC3P02656 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOC3P02656 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOC3P02656 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOC3P02656 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOC3P02656 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.52□□□□□ -0.24
APOC3P02656 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOC3P02656 COL6A4P2-202ENST00000504443 2753 ntBASIC13.52□□□□□ -0.24
APOC3P02656 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
APOC3P02656 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms