Protein–RNA interactions for Protein: O95361

TRIM16, Tripartite motif-containing protein 16, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16O95361 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRIM16O95361 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRIM16O95361 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRIM16O95361 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM16O95361 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRIM16O95361 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM16O95361 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM16O95361 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.09■□□□□ 0.33
TRIM16O95361 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM16O95361 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM16O95361 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM16O95361 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM16O95361 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM16O95361 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM16O95361 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRIM16O95361 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM16O95361 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRIM16O95361 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM16O95361 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM16O95361 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM16O95361 AC027612.4-201ENST00000605371 583 ntBASIC17.09■□□□□ 0.33
TRIM16O95361 GPR89P-201ENST00000407924 1495 ntBASIC17.09■□□□□ 0.33
TRIM16O95361 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM16O95361 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM16O95361 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM16O95361 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM16O95361 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM16O95361 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM16O95361 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM16O95361 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM16O95361 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRIM16O95361 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM16O95361 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM16O95361 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM16O95361 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM16O95361 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM16O95361 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM16O95361 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM16O95361 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM16O95361 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
TRIM16O95361 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
TRIM16O95361 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM16O95361 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM16O95361 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM16O95361 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM16O95361 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.08■□□□□ 0.33
TRIM16O95361 AC097637.2-201ENST00000624096 1997 ntBASIC17.08■□□□□ 0.33
TRIM16O95361 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TRIM16O95361 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TRIM16O95361 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM16O95361 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TRIM16O95361 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM16O95361 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM16O95361 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM16O95361 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM16O95361 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM16O95361 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM16O95361 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM16O95361 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM16O95361 HCG4B-203ENST00000450128 991 ntBASIC17.08■□□□□ 0.32
TRIM16O95361 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM16O95361 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM16O95361 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM16O95361 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TRIM16O95361 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM16O95361 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM16O95361 AC025678.2-201ENST00000562061 970 ntBASIC17.08■□□□□ 0.32
TRIM16O95361 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM16O95361 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM16O95361 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM16O95361 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM16O95361 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM16O95361 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM16O95361 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRIM16O95361 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRIM16O95361 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM16O95361 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM16O95361 AC124067.4-201ENST00000519691 2379 ntBASIC17.08■□□□□ 0.32
TRIM16O95361 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM16O95361 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM16O95361 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM16O95361 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM16O95361 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM16O95361 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM16O95361 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM16O95361 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRIM16O95361 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM16O95361 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM16O95361 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM16O95361 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM16O95361 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM16O95361 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM16O95361 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM16O95361 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM16O95361 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM16O95361 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM16O95361 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM16O95361 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM16O95361 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM16O95361 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms