Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLSTN1O94985 AC079776.2-201ENST00000641154 1609 ntBASIC18.73■□□□□ 0.59
CLSTN1O94985 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CLSTN1O94985 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CLSTN1O94985 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.73■□□□□ 0.59
CLSTN1O94985 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.73■□□□□ 0.59
CLSTN1O94985 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CLSTN1O94985 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLSTN1O94985 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CLSTN1O94985 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLSTN1O94985 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLSTN1O94985 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLSTN1O94985 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLSTN1O94985 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLSTN1O94985 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLSTN1O94985 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLSTN1O94985 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CLSTN1O94985 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLSTN1O94985 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLSTN1O94985 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.72■□□□□ 0.59
CLSTN1O94985 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.72■□□□□ 0.59
CLSTN1O94985 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLSTN1O94985 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLSTN1O94985 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
CLSTN1O94985 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.72■□□□□ 0.59
CLSTN1O94985 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CLSTN1O94985 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.72■□□□□ 0.59
CLSTN1O94985 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.72■□□□□ 0.59
CLSTN1O94985 AC079781.3-201ENST00000449110 356 ntBASIC18.72■□□□□ 0.59
CLSTN1O94985 FGFR3P6-201ENST00000457012 610 ntBASIC18.72■□□□□ 0.59
CLSTN1O94985 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.72■□□□□ 0.59
CLSTN1O94985 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLSTN1O94985 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.72■□□□□ 0.59
CLSTN1O94985 SART3-203ENST00000546611 1184 ntBASIC18.72■□□□□ 0.59
CLSTN1O94985 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.72■□□□□ 0.59
CLSTN1O94985 AL121912.1-201ENST00000603683 238 ntBASIC18.72■□□□□ 0.59
CLSTN1O94985 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLSTN1O94985 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.72■□□□□ 0.59
CLSTN1O94985 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLSTN1O94985 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.72■□□□□ 0.59
CLSTN1O94985 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLSTN1O94985 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLSTN1O94985 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLSTN1O94985 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLSTN1O94985 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.72■□□□□ 0.59
CLSTN1O94985 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.72■□□□□ 0.59
CLSTN1O94985 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.72■□□□□ 0.59
CLSTN1O94985 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLSTN1O94985 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLSTN1O94985 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLSTN1O94985 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLSTN1O94985 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLSTN1O94985 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLSTN1O94985 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.71■□□□□ 0.59
CLSTN1O94985 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLSTN1O94985 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.71■□□□□ 0.59
CLSTN1O94985 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLSTN1O94985 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CLSTN1O94985 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.71■□□□□ 0.59
CLSTN1O94985 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.71■□□□□ 0.59
CLSTN1O94985 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLSTN1O94985 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.71■□□□□ 0.59
CLSTN1O94985 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLSTN1O94985 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLSTN1O94985 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLSTN1O94985 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLSTN1O94985 AF186996.4-201ENST00000467186 377 ntBASIC18.71■□□□□ 0.59
CLSTN1O94985 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.71■□□□□ 0.59
CLSTN1O94985 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLSTN1O94985 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.71■□□□□ 0.59
CLSTN1O94985 AL031008.1-201ENST00000619963 541 ntBASIC18.71■□□□□ 0.59
CLSTN1O94985 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLSTN1O94985 AL022326.1-202ENST00000641533 845 ntBASIC18.71■□□□□ 0.59
CLSTN1O94985 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
CLSTN1O94985 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.71■□□□□ 0.59
CLSTN1O94985 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLSTN1O94985 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLSTN1O94985 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.71■□□□□ 0.59
CLSTN1O94985 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLSTN1O94985 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLSTN1O94985 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLSTN1O94985 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLSTN1O94985 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CLSTN1O94985 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CLSTN1O94985 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLSTN1O94985 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
CLSTN1O94985 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLSTN1O94985 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLSTN1O94985 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLSTN1O94985 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLSTN1O94985 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CLSTN1O94985 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLSTN1O94985 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLSTN1O94985 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLSTN1O94985 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLSTN1O94985 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLSTN1O94985 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CLSTN1O94985 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLSTN1O94985 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLSTN1O94985 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms