Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFPL1O75677 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RFPL1O75677 AC005052.1-201ENST00000625181 2492 ntBASIC16.94■□□□□ 0.3
RFPL1O75677 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
RFPL1O75677 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFPL1O75677 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFPL1O75677 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.94■□□□□ 0.3
RFPL1O75677 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFPL1O75677 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RFPL1O75677 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.94■□□□□ 0.3
RFPL1O75677 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFPL1O75677 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RFPL1O75677 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.94■□□□□ 0.3
RFPL1O75677 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.94■□□□□ 0.3
RFPL1O75677 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.94■□□□□ 0.3
RFPL1O75677 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFPL1O75677 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
RFPL1O75677 MTHFR-217ENST00000641820 1569 ntBASIC16.94■□□□□ 0.3
RFPL1O75677 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFPL1O75677 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFPL1O75677 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFPL1O75677 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFPL1O75677 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RFPL1O75677 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RFPL1O75677 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFPL1O75677 AC004817.3-201ENST00000602957 2129 ntBASIC16.93■□□□□ 0.3
RFPL1O75677 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFPL1O75677 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFPL1O75677 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RFPL1O75677 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFPL1O75677 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFPL1O75677 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFPL1O75677 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.93■□□□□ 0.3
RFPL1O75677 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.93■□□□□ 0.3
RFPL1O75677 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFPL1O75677 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFPL1O75677 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.93■□□□□ 0.3
RFPL1O75677 KRT18P67-201ENST00000432816 1264 ntBASIC16.93■□□□□ 0.3
RFPL1O75677 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFPL1O75677 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.93■□□□□ 0.3
RFPL1O75677 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFPL1O75677 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.93■□□□□ 0.3
RFPL1O75677 HLA-J-202ENST00000469281 1241 ntBASIC16.93■□□□□ 0.3
RFPL1O75677 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.93■□□□□ 0.3
RFPL1O75677 AC093909.1-201ENST00000504731 1122 ntBASIC16.93■□□□□ 0.3
RFPL1O75677 AC096582.2-201ENST00000510860 516 ntBASIC16.93■□□□□ 0.3
RFPL1O75677 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.93■□□□□ 0.3
RFPL1O75677 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.93■□□□□ 0.3
RFPL1O75677 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.93■□□□□ 0.3
RFPL1O75677 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.93■□□□□ 0.3
RFPL1O75677 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFPL1O75677 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFPL1O75677 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.93■□□□□ 0.3
RFPL1O75677 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RFPL1O75677 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFPL1O75677 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.93■□□□□ 0.3
RFPL1O75677 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFPL1O75677 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.93■□□□□ 0.3
RFPL1O75677 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RFPL1O75677 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFPL1O75677 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.92■□□□□ 0.3
RFPL1O75677 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFPL1O75677 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFPL1O75677 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFPL1O75677 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFPL1O75677 AL365203.3-201ENST00000609742 2057 ntBASIC16.92■□□□□ 0.3
RFPL1O75677 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFPL1O75677 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.92■□□□□ 0.3
RFPL1O75677 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFPL1O75677 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.92■□□□□ 0.3
RFPL1O75677 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFPL1O75677 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFPL1O75677 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFPL1O75677 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.92■□□□□ 0.3
RFPL1O75677 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.92■□□□□ 0.3
RFPL1O75677 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.92■□□□□ 0.3
RFPL1O75677 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.92■□□□□ 0.3
RFPL1O75677 SIGLEC30P-201ENST00000455569 941 ntBASIC16.92■□□□□ 0.3
RFPL1O75677 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.92■□□□□ 0.3
RFPL1O75677 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.92■□□□□ 0.3
RFPL1O75677 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.92■□□□□ 0.3
RFPL1O75677 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.92■□□□□ 0.3
RFPL1O75677 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.92■□□□□ 0.3
RFPL1O75677 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.92■□□□□ 0.3
RFPL1O75677 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.92■□□□□ 0.3
RFPL1O75677 AP000867.4-201ENST00000641616 219 ntBASIC16.92■□□□□ 0.3
RFPL1O75677 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RFPL1O75677 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RFPL1O75677 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFPL1O75677 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RFPL1O75677 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFPL1O75677 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFPL1O75677 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFPL1O75677 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFPL1O75677 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.92■□□□□ 0.3
RFPL1O75677 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.92■□□□□ 0.3
RFPL1O75677 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFPL1O75677 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFPL1O75677 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFPL1O75677 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms