Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
PFDN1O60925 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
PFDN1O60925 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PFDN1O60925 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.05■□□□□ -0
PFDN1O60925 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PFDN1O60925 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PFDN1O60925 AC006504.5-208ENST00000588784 2401 ntBASIC15.05■□□□□ -0
PFDN1O60925 HAL-202ENST00000538703 2637 ntTSL 2 BASIC15.05■□□□□ -0
PFDN1O60925 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PFDN1O60925 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PFDN1O60925 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.05■□□□□ -0
PFDN1O60925 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PFDN1O60925 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PFDN1O60925 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PFDN1O60925 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.04■□□□□ -0
PFDN1O60925 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PFDN1O60925 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PFDN1O60925 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PFDN1O60925 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PFDN1O60925 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PFDN1O60925 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PFDN1O60925 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.04■□□□□ -0
PFDN1O60925 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.04■□□□□ -0
PFDN1O60925 AL109954.1-202ENST00000564051 2148 ntBASIC15.04■□□□□ -0
PFDN1O60925 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.04■□□□□ -0
PFDN1O60925 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PFDN1O60925 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PFDN1O60925 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PFDN1O60925 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PFDN1O60925 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
PFDN1O60925 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC15.04■□□□□ -0
PFDN1O60925 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PFDN1O60925 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PFDN1O60925 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.04■□□□□ -0
PFDN1O60925 GUSBP5-201ENST00000418136 578 ntBASIC15.04■□□□□ -0
PFDN1O60925 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.04■□□□□ -0
PFDN1O60925 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PFDN1O60925 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.04■□□□□ -0
PFDN1O60925 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PFDN1O60925 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.04■□□□□ -0
PFDN1O60925 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PFDN1O60925 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PFDN1O60925 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.04■□□□□ -0
PFDN1O60925 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PFDN1O60925 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
PFDN1O60925 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.04■□□□□ -0
PFDN1O60925 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PFDN1O60925 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.04■□□□□ -0
PFDN1O60925 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC15.04■□□□□ -0
PFDN1O60925 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PFDN1O60925 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.04■□□□□ -0
PFDN1O60925 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PFDN1O60925 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PFDN1O60925 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PFDN1O60925 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.03■□□□□ -0
PFDN1O60925 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PFDN1O60925 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PFDN1O60925 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.03■□□□□ -0
PFDN1O60925 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.03■□□□□ -0
PFDN1O60925 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PFDN1O60925 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.03■□□□□ -0
PFDN1O60925 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.03■□□□□ -0
PFDN1O60925 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PFDN1O60925 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.03■□□□□ -0
PFDN1O60925 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
PFDN1O60925 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PFDN1O60925 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PFDN1O60925 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.03■□□□□ -0
PFDN1O60925 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.03■□□□□ -0
PFDN1O60925 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PFDN1O60925 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.03■□□□□ -0
PFDN1O60925 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.03■□□□□ -0
PFDN1O60925 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PFDN1O60925 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PFDN1O60925 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.03■□□□□ -0
PFDN1O60925 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PFDN1O60925 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PFDN1O60925 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PFDN1O60925 ME2P1-201ENST00000426028 1970 ntBASIC15.03■□□□□ -0
PFDN1O60925 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PFDN1O60925 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
PFDN1O60925 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PFDN1O60925 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PFDN1O60925 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.03■□□□□ -0
PFDN1O60925 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC15.03■□□□□ -0
PFDN1O60925 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PFDN1O60925 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.03■□□□□ -0
PFDN1O60925 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.03■□□□□ -0
PFDN1O60925 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PFDN1O60925 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
PFDN1O60925 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.03■□□□□ -0
PFDN1O60925 SSR4P1-203ENST00000599569 2260 ntBASIC15.03■□□□□ -0
PFDN1O60925 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PFDN1O60925 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PFDN1O60925 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.02■□□□□ -0
PFDN1O60925 DMBT1P1-203ENST00000636837 4628 ntBASIC15.02■□□□□ -0
PFDN1O60925 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.02■□□□□ -0
PFDN1O60925 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PFDN1O60925 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PFDN1O60925 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms