Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.3□□□□□ -0.28
CUBNO60494 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
CUBNO60494 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.3□□□□□ -0.28
CUBNO60494 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CUBNO60494 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.3□□□□□ -0.28
CUBNO60494 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CUBNO60494 MYCLP2-201ENST00000449268 967 ntBASIC13.3□□□□□ -0.28
CUBNO60494 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.3□□□□□ -0.28
CUBNO60494 AC005412.3-201ENST00000580309 715 ntBASIC13.3□□□□□ -0.28
CUBNO60494 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.3□□□□□ -0.28
CUBNO60494 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.3□□□□□ -0.28
CUBNO60494 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CUBNO60494 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CUBNO60494 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CUBNO60494 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CUBNO60494 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.3□□□□□ -0.28
CUBNO60494 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CUBNO60494 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CUBNO60494 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 RHOQP1-201ENST00000555758 579 ntBASIC13.3□□□□□ -0.28
CUBNO60494 AL589739.1-201ENST00000607720 493 ntBASIC13.3□□□□□ -0.28
CUBNO60494 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.3□□□□□ -0.28
CUBNO60494 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CUBNO60494 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.29□□□□□ -0.28
CUBNO60494 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CUBNO60494 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CUBNO60494 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.29□□□□□ -0.28
CUBNO60494 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.29□□□□□ -0.28
CUBNO60494 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.29□□□□□ -0.28
CUBNO60494 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CUBNO60494 AC138028.4-201ENST00000564984 1845 ntBASIC13.29□□□□□ -0.28
CUBNO60494 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CUBNO60494 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.29□□□□□ -0.28
CUBNO60494 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.29□□□□□ -0.28
CUBNO60494 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CUBNO60494 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CUBNO60494 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.29□□□□□ -0.28
CUBNO60494 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
CUBNO60494 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CUBNO60494 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CUBNO60494 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC13.29□□□□□ -0.28
CUBNO60494 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.29□□□□□ -0.28
CUBNO60494 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CUBNO60494 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.29□□□□□ -0.28
CUBNO60494 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CUBNO60494 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.29□□□□□ -0.28
CUBNO60494 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CUBNO60494 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.29□□□□□ -0.28
CUBNO60494 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CUBNO60494 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.29□□□□□ -0.28
CUBNO60494 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CUBNO60494 PP12613-201ENST00000424958 2230 ntBASIC13.29□□□□□ -0.28
CUBNO60494 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.29□□□□□ -0.28
CUBNO60494 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.29□□□□□ -0.28
CUBNO60494 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CUBNO60494 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CUBNO60494 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CUBNO60494 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CUBNO60494 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CUBNO60494 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CUBNO60494 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.29□□□□□ -0.28
CUBNO60494 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.29□□□□□ -0.28
CUBNO60494 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.29□□□□□ -0.28
CUBNO60494 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CUBNO60494 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CUBNO60494 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.29□□□□□ -0.28
CUBNO60494 TMEM261P1-201ENST00000604899 340 ntBASIC13.29□□□□□ -0.28
CUBNO60494 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.29□□□□□ -0.28
CUBNO60494 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CUBNO60494 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.29□□□□□ -0.28
CUBNO60494 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CUBNO60494 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CUBNO60494 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CUBNO60494 AC067852.2-201ENST00000590513 2313 ntBASIC13.29□□□□□ -0.28
CUBNO60494 TNXA-203ENST00000507684 2038 ntBASIC13.29□□□□□ -0.28
CUBNO60494 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.28□□□□□ -0.28
CUBNO60494 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms