Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.4■□□□□ 0.38
TRANK1O15050 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRANK1O15050 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TRANK1O15050 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.4■□□□□ 0.38
TRANK1O15050 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRANK1O15050 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.4■□□□□ 0.38
TRANK1O15050 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.4■□□□□ 0.38
TRANK1O15050 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.4■□□□□ 0.38
TRANK1O15050 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
TRANK1O15050 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.39■□□□□ 0.38
TRANK1O15050 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.39■□□□□ 0.37
TRANK1O15050 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRANK1O15050 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.39■□□□□ 0.37
TRANK1O15050 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.39■□□□□ 0.37
TRANK1O15050 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.39■□□□□ 0.37
TRANK1O15050 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.39■□□□□ 0.37
TRANK1O15050 SDHAP3-202ENST00000515467 728 ntBASIC17.39■□□□□ 0.37
TRANK1O15050 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.39■□□□□ 0.37
TRANK1O15050 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.39■□□□□ 0.37
TRANK1O15050 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.39■□□□□ 0.37
TRANK1O15050 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.39■□□□□ 0.37
TRANK1O15050 AL033527.5-201ENST00000641382 801 ntBASIC17.39■□□□□ 0.37
TRANK1O15050 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRANK1O15050 AC087289.5-201ENST00000586076 3175 ntBASIC17.39■□□□□ 0.37
TRANK1O15050 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRANK1O15050 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRANK1O15050 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.39■□□□□ 0.37
TRANK1O15050 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRANK1O15050 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRANK1O15050 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TRANK1O15050 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRANK1O15050 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRANK1O15050 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
TRANK1O15050 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRANK1O15050 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.39■□□□□ 0.37
TRANK1O15050 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRANK1O15050 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRANK1O15050 MEP1AP4-201ENST00000423244 1087 ntBASIC17.39■□□□□ 0.37
TRANK1O15050 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRANK1O15050 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRANK1O15050 AC123567.1-201ENST00000548294 1261 ntBASIC17.39■□□□□ 0.37
TRANK1O15050 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRANK1O15050 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRANK1O15050 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.39■□□□□ 0.37
TRANK1O15050 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRANK1O15050 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.39■□□□□ 0.37
TRANK1O15050 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRANK1O15050 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRANK1O15050 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.38■□□□□ 0.37
TRANK1O15050 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.38■□□□□ 0.37
TRANK1O15050 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.38■□□□□ 0.37
TRANK1O15050 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.38■□□□□ 0.37
TRANK1O15050 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.38■□□□□ 0.37
TRANK1O15050 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRANK1O15050 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRANK1O15050 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.38■□□□□ 0.37
TRANK1O15050 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRANK1O15050 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRANK1O15050 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRANK1O15050 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRANK1O15050 SPDYE17-201ENST00000412399 783 ntBASIC17.38■□□□□ 0.37
TRANK1O15050 AC099336.1-201ENST00000417053 1171 ntBASIC17.38■□□□□ 0.37
TRANK1O15050 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRANK1O15050 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.38■□□□□ 0.37
TRANK1O15050 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRANK1O15050 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.38■□□□□ 0.37
TRANK1O15050 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRANK1O15050 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRANK1O15050 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRANK1O15050 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
TRANK1O15050 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.38■□□□□ 0.37
TRANK1O15050 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRANK1O15050 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.38■□□□□ 0.37
TRANK1O15050 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRANK1O15050 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRANK1O15050 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRANK1O15050 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRANK1O15050 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRANK1O15050 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRANK1O15050 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
TRANK1O15050 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRANK1O15050 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRANK1O15050 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.37■□□□□ 0.37
TRANK1O15050 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.37■□□□□ 0.37
TRANK1O15050 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TRANK1O15050 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.37■□□□□ 0.37
TRANK1O15050 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRANK1O15050 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.37■□□□□ 0.37
TRANK1O15050 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRANK1O15050 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRANK1O15050 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.37■□□□□ 0.37
TRANK1O15050 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.37■□□□□ 0.37
TRANK1O15050 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.37■□□□□ 0.37
TRANK1O15050 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.37■□□□□ 0.37
TRANK1O15050 BTNL10-201ENST00000595971 695 ntBASIC17.37■□□□□ 0.37
TRANK1O15050 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRANK1O15050 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRANK1O15050 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.37■□□□□ 0.37
TRANK1O15050 AC133963.1-201ENST00000504166 1679 ntBASIC17.37■□□□□ 0.37
TRANK1O15050 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms