Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
UBFD1O14562 AL139424.1-201ENST00000607572 797 ntBASIC16.36■□□□□ 0.21
UBFD1O14562 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.36■□□□□ 0.21
UBFD1O14562 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.36■□□□□ 0.21
UBFD1O14562 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBFD1O14562 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBFD1O14562 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.36■□□□□ 0.21
UBFD1O14562 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.36■□□□□ 0.21
UBFD1O14562 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
UBFD1O14562 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBFD1O14562 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBFD1O14562 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBFD1O14562 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.36■□□□□ 0.21
UBFD1O14562 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBFD1O14562 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBFD1O14562 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBFD1O14562 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.35■□□□□ 0.21
UBFD1O14562 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBFD1O14562 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.35■□□□□ 0.21
UBFD1O14562 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
UBFD1O14562 AL356309.3-201ENST00000624132 1934 ntBASIC16.35■□□□□ 0.21
UBFD1O14562 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
UBFD1O14562 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBFD1O14562 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
UBFD1O14562 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBFD1O14562 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBFD1O14562 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBFD1O14562 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBFD1O14562 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBFD1O14562 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBFD1O14562 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBFD1O14562 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
UBFD1O14562 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBFD1O14562 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBFD1O14562 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBFD1O14562 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.35■□□□□ 0.21
UBFD1O14562 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.35■□□□□ 0.21
UBFD1O14562 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.35■□□□□ 0.21
UBFD1O14562 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.35■□□□□ 0.21
UBFD1O14562 MIR4492-201ENST00000581627 80 ntBASIC16.35■□□□□ 0.21
UBFD1O14562 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.35■□□□□ 0.21
UBFD1O14562 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.35■□□□□ 0.21
UBFD1O14562 AL589182.2-201ENST00000619332 1049 ntBASIC16.35■□□□□ 0.21
UBFD1O14562 AC093458.2-201ENST00000623150 629 ntBASIC16.35■□□□□ 0.21
UBFD1O14562 AL139288.1-201ENST00000623748 933 ntBASIC16.35■□□□□ 0.21
UBFD1O14562 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBFD1O14562 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.35■□□□□ 0.21
UBFD1O14562 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBFD1O14562 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBFD1O14562 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBFD1O14562 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.35■□□□□ 0.21
UBFD1O14562 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
UBFD1O14562 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBFD1O14562 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBFD1O14562 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBFD1O14562 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.35■□□□□ 0.21
UBFD1O14562 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.35■□□□□ 0.21
UBFD1O14562 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.35■□□□□ 0.21
UBFD1O14562 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.35■□□□□ 0.21
UBFD1O14562 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.34■□□□□ 0.21
UBFD1O14562 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.34■□□□□ 0.21
UBFD1O14562 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.34■□□□□ 0.21
UBFD1O14562 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.34■□□□□ 0.21
UBFD1O14562 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.34■□□□□ 0.21
UBFD1O14562 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
UBFD1O14562 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
UBFD1O14562 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 RBM17P3-201ENST00000417687 1192 ntBASIC16.34■□□□□ 0.21
UBFD1O14562 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.34■□□□□ 0.21
UBFD1O14562 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.34■□□□□ 0.21
UBFD1O14562 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
UBFD1O14562 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.34■□□□□ 0.21
UBFD1O14562 MTDHP3-201ENST00000594186 672 ntBASIC16.34■□□□□ 0.21
UBFD1O14562 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.34■□□□□ 0.21
UBFD1O14562 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.34■□□□□ 0.21
UBFD1O14562 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
UBFD1O14562 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
UBFD1O14562 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.34■□□□□ 0.21
UBFD1O14562 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.34■□□□□ 0.21
UBFD1O14562 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.34■□□□□ 0.21
UBFD1O14562 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.34■□□□□ 0.21
UBFD1O14562 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.34■□□□□ 0.21
UBFD1O14562 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms