Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.3■□□□□ 0.68
TMEM88BA6NKF7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM88BA6NKF7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM88BA6NKF7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM88BA6NKF7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM88BA6NKF7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.3■□□□□ 0.68
TMEM88BA6NKF7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM88BA6NKF7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM88BA6NKF7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM88BA6NKF7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM88BA6NKF7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TMEM88BA6NKF7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 AC026979.3-201ENST00000607315 403 ntBASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 CU634019.7-201ENST00000624153 1185 ntBASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 FP236241.2-201ENST00000624906 1185 ntBASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM88BA6NKF7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 AP001258.2-201ENST00000529891 490 ntBASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 RN7SL560P-201ENST00000577943 264 ntBASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 AC020765.3-201ENST00000613051 740 ntBASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM88BA6NKF7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 KRT8P49-201ENST00000604166 1432 ntBASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms