Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TVP23AA6NH52 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
TVP23AA6NH52 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TVP23AA6NH52 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TVP23AA6NH52 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.11■□□□□ 0.01
TVP23AA6NH52 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TVP23AA6NH52 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TVP23AA6NH52 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TVP23AA6NH52 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
TVP23AA6NH52 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.1■□□□□ 0.01
TVP23AA6NH52 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 AC079776.2-201ENST00000641154 1609 ntBASIC15.1■□□□□ 0.01
TVP23AA6NH52 SIGLEC16-201ENST00000599858 1437 ntBASIC15.1■□□□□ 0.01
TVP23AA6NH52 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TVP23AA6NH52 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TVP23AA6NH52 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.1■□□□□ 0.01
TVP23AA6NH52 AC011270.2-201ENST00000624293 2550 ntBASIC15.1■□□□□ 0.01
TVP23AA6NH52 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.1■□□□□ 0.01
TVP23AA6NH52 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.1■□□□□ 0.01
TVP23AA6NH52 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TVP23AA6NH52 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.1■□□□□ 0.01
TVP23AA6NH52 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.1■□□□□ 0.01
TVP23AA6NH52 BX005266.1-201ENST00000473402 457 ntBASIC15.1■□□□□ 0.01
TVP23AA6NH52 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TVP23AA6NH52 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.1■□□□□ 0.01
TVP23AA6NH52 AP002490.2-201ENST00000524791 560 ntBASIC15.1■□□□□ 0.01
TVP23AA6NH52 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.1■□□□□ 0.01
TVP23AA6NH52 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TVP23AA6NH52 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
TVP23AA6NH52 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.1■□□□□ 0.01
TVP23AA6NH52 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
TVP23AA6NH52 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TVP23AA6NH52 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TVP23AA6NH52 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TVP23AA6NH52 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TVP23AA6NH52 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TVP23AA6NH52 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TVP23AA6NH52 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TVP23AA6NH52 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TVP23AA6NH52 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.09■□□□□ 0.01
TVP23AA6NH52 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TVP23AA6NH52 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TVP23AA6NH52 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TVP23AA6NH52 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
TVP23AA6NH52 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TVP23AA6NH52 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TVP23AA6NH52 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.09■□□□□ 0.01
TVP23AA6NH52 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TVP23AA6NH52 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.09■□□□□ 0.01
TVP23AA6NH52 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TVP23AA6NH52 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
TVP23AA6NH52 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.09■□□□□ 0.01
TVP23AA6NH52 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.09■□□□□ 0.01
TVP23AA6NH52 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TVP23AA6NH52 ATP5G2P1-201ENST00000433580 426 ntBASIC15.09■□□□□ 0.01
TVP23AA6NH52 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.09■□□□□ 0.01
TVP23AA6NH52 AC132008.2-207ENST00000454517 770 ntBASIC15.09■□□□□ 0.01
TVP23AA6NH52 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.09■□□□□ 0.01
TVP23AA6NH52 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.09■□□□□ 0.01
TVP23AA6NH52 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TVP23AA6NH52 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.09■□□□□ 0.01
TVP23AA6NH52 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
TVP23AA6NH52 DUX4L17-201ENST00000557360 1267 ntBASIC15.09■□□□□ 0.01
TVP23AA6NH52 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.09■□□□□ 0.01
TVP23AA6NH52 AP001269.4-201ENST00000609611 512 ntBASIC15.09■□□□□ 0.01
TVP23AA6NH52 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.09■□□□□ 0.01
TVP23AA6NH52 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TVP23AA6NH52 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TVP23AA6NH52 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TVP23AA6NH52 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TVP23AA6NH52 ALOX12P2-203ENST00000570921 1945 ntBASIC15.09■□□□□ 0.01
TVP23AA6NH52 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.09■□□□□ 0.01
TVP23AA6NH52 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
TVP23AA6NH52 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TVP23AA6NH52 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TVP23AA6NH52 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TVP23AA6NH52 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms