Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC124947.2-201ENST00000547118 1133 ntBASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
TCRBV4S1A1TA0A5B7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TCRBV4S1A1TA0A5B7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TCRBV4S1A1TA0A5B7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.58□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AL603756.1-201ENST00000606511 2163 ntBASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC007967.2-201ENST00000432613 625 ntBASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC108751.1-201ENST00000490852 363 ntBASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC019129.2-201ENST00000609837 1235 ntBASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC139530.3-201ENST00000620344 690 ntBASIC13.58□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms