Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 NUS1P1-201ENST00000446295 882 ntBASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 CYP2T1P-202ENST00000641596 2535 ntBASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 AP001269.4-201ENST00000609611 512 ntBASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 AL732292.2-201ENST00000609649 430 ntBASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 AP005117.1-201ENST00000584346 1413 ntBASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 AL139384.1-201ENST00000612143 3047 ntBASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RHBDD3Q9Y3P4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 AC004817.3-201ENST00000602957 2129 ntBASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 SIGLEC16-201ENST00000599858 1437 ntBASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 AC079776.2-201ENST00000641154 1609 ntBASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms