Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 AC099063.4-201ENST00000641099 1602 ntBASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 TP73-AS1-210ENST00000637775 1455 ntBASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 DBET-201ENST00000630918 3363 ntBASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 POM121L3P-201ENST00000419331 1163 ntBASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 AC091607.1-201ENST00000490318 1060 ntBASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 AC109462.3-201ENST00000573934 613 ntBASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 AP005901.3-202ENST00000581653 237 ntBASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 NPAP1P7-201ENST00000613027 823 ntBASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 NSUN5P1-202ENST00000421140 1535 ntBASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 NSUN5P2-203ENST00000457352 1529 ntBASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC12.4□□□□□ -0.42
HHLA3Q9XRX5 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
HHLA3Q9XRX5 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.4□□□□□ -0.43
HHLA3Q9XRX5 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
HHLA3Q9XRX5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
HHLA3Q9XRX5 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
HHLA3Q9XRX5 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.43
HHLA3Q9XRX5 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 AC096582.2-201ENST00000510860 516 ntBASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.39□□□□□ -0.43
HHLA3Q9XRX5 MIR3180-1-201ENST00000580374 94 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms